Table 3 Genes upregulated by TSA treatment in HEPG2 cells (representative genes from total of 254 genes at 2-fold level of expression)
From: Histone deacetylase inhibitors: A new mode for inhibition of cholesterol metabolism
Treatment type | EtOH | TSA | Â | Â | |||
|---|---|---|---|---|---|---|---|
Systematic | FC | Norm | SE | Norm | SE | Gene | GB Acc |
214023_x_at | 18.5 | 1.00 | 0.1 | 18.61 | 1.2 | TUBB | AL533838 |
201008_s_at | 10.2 | 0.94 | 0.1 | 9.60 | 1.1 | TXNIP | AA812232 |
227404_s_at | 9.5 | 1.00 | 0.1 | 9.50 | 0.3 | EGR1 | AI459194 |
218280_x_at | 6.5 | 0.92 | 0.1 | 5.97 | 0.4 | HIST2H2AA | NM_003516 |
221059_s_at | 4.6 | 0.95 | 0.1 | 4.36 | 0.2 | CHST6 | NM_021615 |
208581_x_at | 4.4 | 0.96 | 0.1 | 4.20 | 0.2 | MT1X | NM_005952 |
203158_s_at | 3.9 | 1.00 | 0.1 | 3.91 | 0.2 | GLS | AF097493 |
206907_at | 3.7 | 1.09 | 0.1 | 4.07 | 0.3 | TNFSF9 | NM_003811 |
202075_s_at | 3.6 | 0.98 | 0.1 | 3.48 | 0.2 | PLTP | NM_006227 |
201666_at | 2.8 | 1.01 | 0.1 | 2.84 | 0.2 | TIMP1 | NM_003254 |
203085_s_at | 2.3 | 1.02 | 0.1 | 2.35 | 0.2 | TGFB1 | BC000125 |
203167_at | 2.3 | 1.00 | 0.1 | 2.25 | 0.0 | TIMP2 | NM_003255 |