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Table 5 HapMap SNPs using YRI HapMap Samples

From: Establishing an adjusted p-value threshold to control the family-wide type 1 error in genome wide association studies

 

Yoruba HapMap Samples

Chromosome

Total number of SNPs

Total number of blocks

Total number Interblock SNPS

Total number of blocks + Interblock SNPs

1

209439

17517

4169

21686

2

238828

19081

5688

24769

3

184337

15409

3635

19044

4

174670

14673

2754

17427

5

176975

14478

3063

17541

6

187787

14073

3127

17200

7

149764

12884

2451

15335

8

158800

13069

2465

15534

9

128582

11602

3185

14787

10

147710

12065

3778

15843

11

136474

11261

2793

14054

12

130298

11142

2383

13525

13

112162

8767

1470

10237

14

88022

7549

1240

8789

15

77885

7979

1657

9636

16

78364

8334

1810

10144

17

62720

6622

1754

8376

18

87027

7466

5294

12760

19

39729

4514

1037

5551

20

68828

6397

1344

7741

21

37450

3717

744

4461

22

36468

3945

790

4735

Total

2,712,319

232,544

56,631

289,175