Table 3 Comparison of the fractions that were identified as repetitive by manual annotation and through MDR analysis.
Sequence | Exp1 | MDR2 | OL3 | New4 | Total5 |
|---|---|---|---|---|---|
AF474373 | 56.8 | 48.1 | 40.9 | 7.1 | 63.9 |
AF521177 | 37.4 | 23.3 | 18.5 | 4.8 | 42.2 |
AY268139 | 71.7 | 58.6 | 55.6 | 3.0 | 74.7 |
AY485643 | 44.4 | 38.2 | 30.8 | 7.4 | 51.8 |
AY642926 | 48.1 | 38.0 | 32.9 | 5.1 | 53.2 |
AY643842S2 | 71.7 | 50.5 | 48.6 | 1.9 | 73.6 |
AY643842S3 | 79.9 | 69.3 | 68.0 | 1.3 | 81.2 |
AY661558 | 87.6 | 62.1 | 59.6 | 2.5 | 90.1 |
EF067844 | 81.5 | 57.7 | 56.0 | 1.7 | 83.2 |
Average | 64.3 | 49.5 | 45.6 | 3.9 | 68.2 |