Table 3 Prediction of signal peptides of proteins identified in the culture supernatant
Protein | Signal peptide probability | Maximum cleavage site probability | Predicted signal length (aa) | Predicted signal peptide | Predicted secretion system | Predicted function |
|---|---|---|---|---|---|---|
RL0196 | 1.000 | 0.999 | 20 | MKKSLLTLFAVAAMSTTALA | GEP | basic membrane lipoprotein |
RL0489 | 1.000 | 1.000 | 23 | MKKSVLAFGALALGVTFSAPVMA | GEP | sugar-binding protein |
RL0518 | 1.000 | 1.000 | 32 | MSIVKSLLSRR AFTALAGAAVIATAMPAPSFA | TAT | ribose-binding protein |
RL0778 | 1.000 | 0.956 | 23 | MKKISVLLAATALISVMATSAWS | GEP | dipeptide-binding protein |
RL1369 | 0.999 | 0.803 | 25 | MAMHGSSLGLLALVLLAFPPVAARA | GEP | pentapeptide repeat protein |
RL2375 | 1.000 | 0.944 | 24 | MKKLALALAATAALVLSIGSAAEA | GEP | basic membrane lipoprotein |
RL2404 | 1.000 | 0.983 | 23 | MKLFYLAFAGVLYLASFAGDAFA | GEP | peptidyl prolyl cis-trans isomerase |
RL2697 | 0.999 | 0.933 | 28 | MMNIAGLGRLAAATVVLSGLAFGSAVKA | GEP | COG3184 |
RL2753 | 1.000 | 1.000 | 25 | MLNSTRIFAAASIAAMSLFAGSAMA | GEP | arginine/ornithine-binding protein |
RL3329 | 1.000 | 0.975 | 25 | MHRSLASCSALALLFALALAGGAAA | GEP | membrane bound lytic tranglycosylase |
RL3745 | 1.000 | 0.999 | 23 | MKKSLLSAVALTAMVAFSGNAWA | GEP | Leu/Ile/Val-binding protein (BraC) |
RL4218 | 1.000 | 0.998 | 22 | MTLRTFLLGACSALAFAGMASA | GEP | sorbitol-binding protein |
RL4651 | 1.000 | 1.000 | 29 | MTKLNRNFRMLSAGAALSLLMMAAPSAFA | GEP | dipeptide-binding protein |
pRL90140 | 0.000 | 0.000 | - | - | PrsDE | parallel beta-helix repeat protein |
pRL100309 | 0.000 | 0.000 | - | - | PrsDE | cadherin-like protein |
pRL100451 | 0.000 | 0.000 | - | - | PrsDE | RapA2 |
RL1580 | 0.000 | 0.000 | - | - | PrsDE | nucleoside diphosphate kinase |
RL2412 | 0.000 | 0.000 | - | - | PrsDE | glycosyl hydrolase |
RL2961 | 0.000 | 0.000 | - | - | PrsDE | cadherin-like protein |
RL3024 | 0.000 | 0.000 | - | - | PrsDE | PlyB |
RL0718 | 0.002 | 0.001 | - | - | Flagellum | flagellin |
RL0720 | 0.012 | 0.005 | - | - | Flagellum | flagellin |
RL0728 | 0.032 | 0.029 | - | - | Flagellum | flagellar hook |