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Figure 4 | BMC Genomics

Figure 4

From: LTR retrotransposons reveal recent extensive inter-subspecies nonreciprocal recombination in Asian cultivated rice

Figure 4

Distribution of presumable ISNR regions in the rice genome. This diagram is based on the japonica genome. The sliding window of 5 Kb shifts 1 bp in each step. Regions in which the average mismatch density ≤ 1.5 = Kb are drawn. Each line represents 50 Kb regions. A line is drawn only when there are at least 10 Kb sequences show ≥ 99.85% conservation. Therefore, many highly conserved "islands" shorter than 10 Kb are not shown here.

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