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Table 4 FLcDNAs corresponding to transcripts most strongly repressed by forest tent caterpillar (FTC) feeding [fold-change (FC) ≥ 2.0, P value < 0.05, Q value < 0.05]

From: Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding

    

NR BLASTP best match

FTC feeding @ 24 h

15.5 K Array ID

Matching FLcDNA ID

GenBank ID

FL status/ORF size (aa)

GenBank accession, gene name, species

BLAST score

FC

P

Q

WS0162_B18

WS01227_D07

EF147075

FL/465

AAX84673.1, cysteine protease, Manihot esculenta

782

0.33

<0.001

<0.001

WS0112_D20

WS0112_D20

EF145637

FL/99

At1g67910, hypothetical protein, Arabidopsis thaliana

69

0.34

<0.001

0.001

WS0126_C06

WS0126_C06

EF147942

FL/121

At2g45180, protease inhibitor/lipid transfer protein, A. thaliana

108

0.34

0.018

0.038

WS0131_P03

WS0131_P03a

EF148510

FL/303

CAN63090.1, zinc finger transcription factor, Vitis vinifera

135

0.36

<0.001

0.001

WS0178_F11

WS01228_M08

EF147174

5' trunc./106

At1g22770, gigantea protein, A. thaliana

150

0.38

<0.001

0.002

WS0127_F15

WS0127_F15

EF148074

FL/173

CAN68427.1, hypothetical protein, V. vinifera

207

0.40

<0.001

0.001

WS0121_B24

WS0128_M21

EF148217

FL/139

AAU03358.1, acyl carrier protein, Lycopersicon esculentum

119

0.41

<0.001

<0.001

WS0147_J04

WS0134_M10

EF148605

n.a.

No protein matches

n.a.

0.41

0.004

0.014

WS0158_G10

WS0128_E13

EF148173

5' trunc./628

At1g56070, elongation factor, A. thaliana

1239

0.41

0.001

0.005

WS0152_E14

WS0112_O08a

EF145715

FL/252

ABH09330.1, aquaporin, V. vinifera

375

0.42

<0.001

0.003

WS0143_B24

WS01227_O15

EF147121

FL/267

At1g06460, small heat shock protein, A. thaliana

146

0.42

<0.001

0.001

WS0127_G18

WS0127_G18

EF148081

n.a.

No protein matches

n.a.

0.43

<0.001

<0.001

WS0182_D02

WS01226_N23

EF147055

FL/335

CAN75691.1, methyltransferase, V. vinifera

534

0.43

0.001

0.005

WS0124_D16

WS0124_D16

EF147668

FL/164

At3g62550, universal stress protein, A. thaliana

188

0.44

<0.001

0.001

WS0163_G24

WS0115_E02

EF146059

FL/341

AAD56659.1, malate dehydrogenase, Glycine max

566

0.45

0.003

0.010

WS0175_O14

WS01313_J01a

EF148349

FL/239

CAN63226.1, hypothetical protein, V. vinifera

313

0.45

<0.001

0.001

WS0178_N22

WS01111_H24

EF144589

FL/161

ABG27020.1, SKP1-like ubiquitin-protein ligase, Medicago truncatula

219

0.46

<0.001

<0.001

WS0121_H19

WS0121_H19

EF146882

FL/350

AAW66657.1, thiamine biosynthetic enzyme, Picrorhiza kurrooa

539

0.48

0.005

0.016

WS0206_B21

WS0131_B11

EF148494

FL/133

CAA59409.1, photosystem II reaction center protein, Spinacia oleracea

140

0.48

0.001

0.006

WS0155_M12

WS0136_E20

EF148683

FL/234

CAN60736.1, hypothetical protein, V. vinifera

313

0.48

0.001

0.007

WS0152_F02

WS01117_K24

EF144742

FL/384

CAN83255.1, CCCH-type zinc finger protein, V. vinifera

432

0.49

<0.001

0.002

WS01224_P10

WS0124_L08a

EF147742

FL/137

CAA28450.1, photosystem II 10 kDa polypeptide, Solanum tuberosum

191

0.49

<0.001

0.003

WS0115_N05

WS0115_N05

EF146146

FL/250

AAM21317.1, auxin-regulated protein, Populus tremula × tremuloides

449

0.50

0.005

0.016

WS0125_F02

WS0125_F02

EF147829

FL/516

At1g60590, polygalacturonase, A. thaliana

715

0.50

0.001

0.005

  1. aMultiple FLcDNAs match to the same microarray EST, a complete list of matching FLcDNAs is provided elsewhere [see Additional file 2].