Table 2 The list of transcripts associated with cuticle hardening that are up-regulated in intermolt (Cy5) crabs when compared against crabs in the post-molt stage (Cy3).
From: Differential expression profiling of components associated with exoskeletal hardening in crustaceans
Clone IDs (Accession #) | BLAST results | Score (Bits) | E value | M * | t * | P-value* | Adjusted P-value* |
|---|---|---|---|---|---|---|---|
PpHEM7 (EF110537) | AY861677 Cancer magister hemocyanin AAW57890 hemocyanin C. magister | 290 455 | 6e-75 1e-126 | -5.147 -4.716 -4.432 | -10.466 -17.112 -14.02 | 0 0 0 | 0.004 0.002 0.002 |
PpHEM3 (EF110533) | AF249297 Callinectes sapidus hemocyanin subunit mRNA AAW57891 hemocyanin subunit 3 C. magister | 807 432 | 0.0 1e-119 | -4.849 -3.951 | -16.719 -14.337 | 0 0 | 0.002 0.002 |
PpTRY1 (EF120993) | AB205408 Seriola quinqueradiata mRNA for trypsinogen CAA75310 trypsin Litopenaeus vannamei | 75.8 318 | 2e-10 2e-85 | -4.655 -4.434 -4.193 -4.154 | -9.19 -13.924 -11.15 -12.959 | 0 0 0 0 | 0.007 0.002 0.004 0.003 |
PpHEM1 (EF110531) | AY861676 C. magister hemocyanin subunit 1 AAW57889 hemocyanin subunit 1 C. magister | 103 335 | 9e-19 1e-90 | -4.473 -4.393 -4.112 | -9.907 -15.061 -15.684 | 0 0 0 | 0.005 0.002 0.002 |
PpTRY2 (EF120994) | AAL67442 trypsin Paralithodes camtschaticus | 62.0 | 1e-08 | -4.473 | -10.021 | 0 | 0.005 |
PpHEM4 (EF110534) | AF249297 C. sapidus hemocyanin subunit mRNA AAF64305 hemocyanin subunit C. sapidus | 870 472 | 0.0 6e-132 | -4.402 -4.295 -4.027 -3.954 -3.784 -3.75 -3.707 -2.331 | -14.753 -14.847 -15.206 -14.946 -14.715 -14.898 -12.568 -6.86 | 0 0 0 0 0 0 0 0.001 | 0.002 0.002 0.002 0.002 0.002 0.002 0.003 0.018 |
PpHEM2 (EF110532) | AY861677 C. magister hemocyanin subunit 2 AAW57890 hemocyanin subunit 2 C. magister | 176 160 | 8e-41 1e-47 | -4.273 | -9.162 | 0 | 0.007 |
PpHEM5 (EF110535) | AF249297 C. sapidus hemocyanin subunit AAW57893 hemocyanin subunit 5 C. magister | 327 195 | 3e-86 2e-89 | -4.18 | -12.698 | 0 | 0.003 |
PpHEM6 (EF110536) | AF249297 C. sapidus hemocyanin subunit mRNA AAW57891 hemocyanin subunit 3 C. magister | 807 432 | 0.0 1e-119 | -4.155 -4.083 -3.999 -3.977 -3.946 -3.869 -3.518 | -16.298 -11.88 -15.838 -14.718 -15.306 -14.029 -13.331 | 0 0 0 0 0 0 0 | 0.002 0.003 0.002 0.002 0.002 0.002 0.003 |
PpTRY3 (EF120995) | Y15041 PVTRYPSN3 Penaeus vannamei trypsin gene CAA75311 trypsin Litopenaeus vannamei | 63.9 253 | 6e-07 3e-66 | -4.119 -4.017 -3.972 -3.246 -3.225 | -10.005 -11.911 -12.269 -8.569 -10.838 | 0 0 0 0 0 | 0.005 0.003 0.003 0.008 0.004 |
PpHEM8 (EF110538) | AF249297 C. sapidus hemocyanin subunit AAF64305 hemocyanin subunit C. sapidus | 95.6 109 | 3e-16 3e-22 | -3.41 | -11.878 | 0 | 0.003 |
PpCTRY1 (EF120996) | CAA71673 Chymotrypsin BII L. vannamei | 32.7 | 4.9 | -2.935 | -9.127 | 0 | 0.007 |
EF120998 | AAD16454 clotting protein precursor Pacifastacus leniusculus (crayfish) | 38.9 | 0.10 | -2.83 | -8.196 | 0 | 0.01 |
PpCTRY2 (EF120997) | HAY12273 H. armigera (cotton bollworm – arthropod) mRNA for putative serine protease (chymotrypsin-like protease) CAA71672 Chymotrypsin BI Litopenaeus vannamei | 50.1 159 | 0.008 6e-38 | -2.433 -2.021 | -8.984 -6.564 | 0 0.001 | 0.007 0.021 |
EF120999 | CAD20734 carcinin Carcinus maenas (antibacterial protein) | 71.2 | 2e-11 | -1.696 | -5.514 | 0.002 | 0.036 |