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Table 2 List and characteristics of the fungal genomes belonging to the subphyla Saccharomycotina and Taphrinomycotina archived in SNUGB.

From: SNUGB: a versatile genome browser supporting comparative and functional fungal genomics

Speciesa Size (Mb) # of ORFs # of Exons Cb Ib Eb Source Refs
Fungi (Kingdom)e         
   Ascomycota (Phylum)         
Saccharomycotina (Subphylum)         
Candida albicans SC5314 14.3 6,090 6,624 N Y N SGTC [56, 57]
Candida albicans WO-1 14.4 6,160 6,395 N Y N BI N
Candida dubliniensis d 14.5 6,027 N N N N SI N
Candida glabrata CBS138 12.3 5,165 5,249 N Y N CBS [58]
A: Candida guilliermondii T: Pichia guilliermondii 10.6 5,920 5,935 N Y N BI N
Candida lusitaniae 12.1 5,941 5,956 N Y N BI N
Candida parapsilosis 13.1 5,733 5,733 N Y N BI N
Candida tropicalis 14.7 6,258 6,292 N Y N BI N
Candida tropicalis f 2.1 N N N N N GS [59]
Ashbya gossypii 8.8 4,717 4,943 7 Y N NCBI [60]
Debaryomyces hansenii 12.2 6,354 6,710 7 Y N CBS [58]
Debaryomyces hansenii f 2.3 N N N N N GS [61]
A: Candida sphaerica T: Kluyveromyces lactis 10.7 5,327 5,457 N Y N GS [58]
A: Candida sphaerica T: Kluyveromyces lactisf 5.1 N N N N N GS [62]
A: Candida kefyr T:Kluyveromyces marxianusf 2.0 N N N N N GS [63]
Kluyveromyces polysporus DSM70294 14.7 5,367 5,524 N Y N SIG [64]
Kluyveromyces thermotolerans f 2.2 N N N N N GS [65]
Kluyveromyces waltii 10.9 4,935 5,395 N Y N BI [66]
Lodderomyces elongisporus 15.5 5,802 5,856 N Y N BI N
Saccharomyces bayanus MCYC 623 11.5 9,385 9,385 N Y N BI [13]
Saccharomyces bayanus 623-6C YM4911 11.9 4,966 4,966 N Y N WGSC [12]
Saccharomyces bayanus var. uvarumf 4.5 N N N N N GS [67]
Saccharomyces castellii 11.4 4,677 4,677 N Y N WGSC [12]
A: Candida robusta S288C T: Saccharomyces cerevisiae S288C 12.2 6,692 7,042 16 Y N SGD [68]
A: Candida robusta RM11-1a T: Saccharomyces cerevisiae RM11-1a 11.7 5,696 5,988 N Y N BI N
A: Candida robusta YJM789 T: Saccharomyces cerevisiae YJM789 12.0 5,903 6,153 N Y N SI [69]
Saccharomyces exiguus f 2.0 N N N N N GS [70]
Saccharomyces kluyveri 11.0 2,968 2,968 N Y N WGSC [12]
Saccharomyces kluyveri f 2.2 N N N N N GS [71]
Saccharomyces kudriavzevii 11.2 3,768 3,768 N Y N WGSC [12]
Saccharomyces mikatae 11.5 9,016 9,016 N Y N BI [13]
Saccharomyces mikatae 10.8 3,100 3,100 N Y N WGSC [12]
Saccharomyces paradoxus 11.9 8,939 8,939 N Y N BI [13]
Saccharomyces servazzii f 2.0 N N N N N GS [72]
Pichia angusta f 4.5 N N N N N GS [73]
Pichia stipitis 15.4 5,839 8,428 N Y N JGI [74]
Pichia sorbitophila f 3.8 N N N N N GS [75]
A: Candida lipolytica T: Yarrowia lipolytica 20.5 6,524 7,264 6 Y N CBS [58]
A: Candida lipolytica T: Yarrowia lipolyticaf 4.6 N N N N N GS [76]
Zygosaccharomyces rouxii f 4.1 N N N N N GS [77]
Taphrinomycotina (Subphylum)         
Pneumocystis carinii c, d 6.3 4,020 N N N N SI N
Schizosaccharomyces japonicus 11.3 5,172 10,321 N Y N BI N
Schizosaccharomyces pombe 12.6 5,058 9,869 3 Y N GDB [78]
Schizosaccharomyces octosporus 11.2 4,925 10,168 N N N BI N
Total 424.6 176,444 188,121 5 28 0   
  1. aA indicates anamorph name and T presents teleomorph name of fungi.
  2. bC means chromosomes, I indicates InterPro, and E presents EST.
  3. cIncomplete coverage of genome information
  4. dInsufficient exon/intron information
  5. eTaxonomy based on [28]
  6. fSequences from Random Sequence Tag (RST)
  7. 'Y' indicates the existence of information in each field, and 'N' indicates the lack of information.