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Table 3 List and characteristics of the genomes belonging to the phyla Basidiomycota, Chytridiomycota, and Microsporidia, the subphylum Mucoromycotina, and the phylum Peronosporomycota (oomycetes) archived in SNUGB.

From: SNUGB: a versatile genome browser supporting comparative and functional fungal genomics

Speciesa Size (Mb) # of ORFs # of Exons Cb Ib Eb Source Refs
Fungi (Kingdom)e         
   Basidiomycota (Phylum)         
Agricomycotina (Subphylum)         
Postia placenta 90.9 17,173 116,596 N Y N JGI N
T: Phanerochaete chrysosporium A: Sporotrichum pruinosum 35.1 10,048 58,746 N Y N JGI [79]
Coprinus cinereus 36.3 13,544 72,887 N Y N BI N
Laccaria bicolor 64.9 20,614 111,290 N Y N JGI [80]
A: Cryptococcus neoformans Serotype A T: Filobasidiella neoformans Serotype A 19.5 7,302 43,325 20 Y N BI N
A: Cryptococcus neoformans Serotype B T: Filobasidiella neoformans Serotype B 19.0 6,870 40,589 N Y N NCBI N
A: Cryptococcus neoformans Serotype D B-3501A T: Filobasidiella neoformans Serotype D B-3501A 18.5 6,431 40,942 N Y N SGTC [41]
A: Cryptococcus neoformans Serotype D JEC21 T: Filobasidiella neoformans Serotype D JEC21 19.1 6,475 40,811 N Y N SGTC [41]
Pucciniomycotina (Subphylum)         
Sporobolomyces roseus 21.2 5,536 39,911 N Y N JGI N
Puccinia graminis 88.7 20,567 95,838 N Y N BI N
Ustilaginomycotina (Subphylum)         
Malassezia globosa CBS7966 9.0 4,286 4,286 N N N PGC [15]
Malassezia restricta CBS7877c 4.6 N N N N N PGC [15]
Ustilago maydis 521 19.7 6,689 11,589 N Y N BI [81]
Ustilago maydis FB1 19.3 6,950 10,310f N Y N BI [81]
   Chytridiomycota (Phylum)         
Batrachochytrium dendrobatidis JEL423 23.9 8,818 38,551 N Y N BI N
Batrachochytrium dendrobatidis JAM81 24.3 8,732 37,423 N Y N JGI N
   Mucoromycotina (Subphylum incertae sedis )         
Rhizopus oryzae 46.1 17,467 57,981 N Y N BI N
Phycomyces blakesleeanus 55.9 14,792 71,502 N Y N JGI N
   Microsporidia (Phylum)         
Encephalitozoon cuniculi 2.5 1,996 2,002 N Y N GS [82]
Antonospora locustae d 6.1 2,606 N N N N JBPC N
Stramenopila (Kingdom) e         
   Peronosporomycota (Phylum)         
Phytophthora capsici 107.8 17,414 45,661 N N N JGI N
Phytophthora infestans d 228.5 22,658 N N N N BI N
Phytophthora ramorum 66.7 15,743 40,639 N Y N JGI [83]
Phytophthora sojae 86.0 19,027 53,552 N Y N JGI [83]
Hyaloperonospora parasitica 83.6 14,789 24,907 N Y N VBI N
Pythium ultimum 44.3 N N N N N   N
Total 1,241.5 276,527 1,058,878 1 20 0   
  1. aA indicates anamorph name and T presents teleomorph name of fungi
  2. bC means chromosomes, I indicates InterPro, and E presents EST.
  3. cIncomplete coverage of genome information
  4. dInsufficient exon/intron information
  5. eTaxonomy based on [28]
  6. fORFs and exons were predicted by AUGUSTUS 2.0.3 with species-specific training datasets [55].
  7. 'Y' indicates the existence of information in each field, and 'N' indicates the lack of information.