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Table 5 Basic properties of different strains of fungal genomes deposited in SNUGB.

From: SNUGB: a versatile genome browser supporting comparative and functional fungal genomics

Species

# of Strains

Genome size (Mb)

GC content (%)

Fungi (Kingdom)

   

   Ascomycota (Phylum)

   

Pezizomycotina (Subphylum)

   

Aspergillus fumigatus

2

29.3 ± 0.1

49.672 ± 0.178

Aspergillus niger

2

35.6 ± 2.3

50.365 ± 0.012

Coccidioides immitis

4

28.3 ± 0.7

46.529 ± 0.514

Coccidioides posadasii

11

27.2 ± 0.9

46.839 ± 0.537

Histoplasma capsulatum

5

36.2 ± 4.7

43.400 ± 1.859

Paracoccidioides brasiliensis

3

30.7 ± 2.0

43.868 ± 0.930

Fusarium graminearum a

2

36.6

48.283

Saccharomycotina (Subphylum)

   

Candida albicans

2

14.4 ± 0.1

33.462 ± 0.010

Saccharomyces cerevisiae

3

11.9 ± 0.3

38.252 ± 0.090

Saccharomyces bayanus

2

11.7 ± 0.3

40.196 ± 0.011

Saccharomyces mikatae b

2

11.1 ± 0.5

37.920 ± 0.315

Basidiomycota (Phylum)

   

Agricomycotina (Subphylum)

   

Cryptococcus neoformans

4

19.2 ± 0.2

48.251 ± 0.316

Ustilaginomycotina (Subphylum)

   

Ustilago maydis

2

19.7 ± 0.0

53.995 ± 0.045

Chytridiomycota (Phylum)

   

Batrachochytrium dendrobatidis

2

24.1 ± 0.3

39.261 ± 0.011

Chloroplastida (Kingdom)

   

   Charophyta (Phylum)

   

Oryza sativa

2

399.2 ± 38.4

43.530 ± 0.046

Vertebrata (Phylum)

   

   Vertebrata (Phylum)

   

Homo sapiens

4

3,052.2 ± 409.3

40.878 ± 0.042

  1. aOne of strains are incomplete whole genome sequences, so that standard deviation of genome length and GC content are not calculated.
  2. bSame strain but different version of assembly