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Table 2 Representative examples of class I, II and III SLRP sequences in sea lamprey.

From: LRRCE: a leucine-rich repeat cysteine capping motif unique to the chordate lineage

LRR

BGL2_PETMA (class I)

N

KERAL_PETMA (class II)

N

 

...PDASCPFGCQCS

 

...PPLCPVACYCPPDH

 

I

ARVVQCSDLGLVSVPQAIPKD

21

PGAIYCDGRELHDVPRIPAR

20

II

ARLLDLQNNKITEIKQDDFKGLNK

24

VRFAYFQNNNIEALSECDLRDAGG

24

III

LYALYLVNNLISKVHPKAFAPLSS

24

LLGLNLDDNVLTSPTLSQDTLRSLRH

26

IV

LDKLYISHNQLTEVPGSMPSS

21

LSQLHLQRNQLTEVPLGLPAS

21

V

LVELRIHENNIKKIPKDAFSGMKR

24

LEDLRLGQNRIALVPKGAFARLSR

24

VI

LHALEMGGNPLQSTGIEVGAFEGLER

26

LRMLDLSANRLQVLRDDAFAGLSA

24

VII

LVYVRVSDSKLARIPKDLPNS

21

LVQLNLAENRLRAMPPKPPSGL

22

VIII

IQELHLEHNQITALEQEDLIRYPL

24

LYQLILCDNVIESIPDNYLASFPR

24

IX

IHRLGLSYNQIKVIQNGSLETCPH

24

LAWLDLGKNALGTRREKRTGIPERAFISRA

30

X

LRELHLDSNVLTQVPPGLAFLKH

23

LLNLRLSANHLQHVPAFHGN

20

XI

LQVVYLHSNKIAAVKSDDFCSKGASPKRVL

30

LVQLHLDENDIEDVNTTALCRPEGRESSR

29

XII

YSGISLFDNPVNYWDVPPSAFRCVASR

27

LSYFRLDKNPIMESPQAPLMHCFPY

25

 

.SAVQFSQNFRK

 

LQPMF

 

LRR

EPYL_PETMA (class III)

N

  
 

...MPTCLLCSCV

   

I

HGSVYCDDLELDSVPPLPKD

20

  

II

TVYLYARFNKIRTLRKKDLSGYAQ

24

  

III

LKRVDLSSNGLTSVEAGALAQLPA

24

  

IV

LEEVLLAGNELVALPELPPA

20

  

V

TRRLDARQNHVTSKGVAADMFEKMKQ

26

  

VI

LEYLYLSDNQLDFIPVPLPDS

21

  

VII

LRVLHLQNNNIQQIREDTFCKPKELSYFRKA

31

  

VIII

LEDVRLDGNPVNLSDAPEAYTCLPR

25

  
 

IPTGATF

   
  1. Repeats are numbered in roman numerals, and N is the length of each repeat. Sequences amino terminal to the LRRNT cluster have not been included.