From: A first glimpse at the transcriptome of Physarum polycephalum
Category | Number of contigs | more than 1 read | alternatively spliced | % of contigs (no singletons) | |
---|---|---|---|---|---|
All groups | 960 (640) | 629 (439) | 105 (75) | 16.7 (17.1) | |
Eukaryote | |||||
All (sum) | 1947 (1607) | 1139 (1012) | 189 (168) | 16.6 (16.6) | |
All Eukaryotes | 511 (420) | 309 (265) | 47 (38) | 15.2 (14.3) | |
Amoebozoa/Protozoa | 370 (323) | 210 (199) | 38 (29) | 18.1 (14.6) | |
not plant | 513 (415) | 281 (259) | 52 (53) | 18.5 (20.5) | |
not vertebrate | 87 (60) | 50 (37) | 7 (5) | 14.0 (13.5) | |
not plant/vertebrate | 58 (54) | 39 (33) | 8 (6) | 20.5 (18.2) | |
plant | 204 (182) | 129 (120) | 18 (22) | 14.0 (18.3) | |
vertebrate | 204 (153) | 121 (99) | 19 (15) | 15.7 (15.2) | |
Prokaryote | 237 (209) | 109 (102) | 32 (20) | 29.4 (19.6) | |
Physarum specific | 2451 (3166) | 1045 (1383) | 179 (243) | 17.1 (17.6) | |
not defined | 261 (234) | 147 (133) | 24 (23) | 16.3 (17.3) | |
sum | 5856 | 3069 | 529 | 17.3 |