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Table 13 LTβR responsive qRT-PCR verified genes in literature

From: Differential RelA- and RelB-dependent gene transcription in LTβR-stimulated mouse embryonic fibroblasts

Gene Symbol and GenBank Accession Number LTβR responsiveness
„reference“ if known/„this study“ if new
In response to LTβR stimulation, transcription is regulated by RelA or RelB, + or - or 0 manner „reference“ if known/„this study“ if new
Cx3cl1
NM_009142
This study + regulation by RelA and RelB together, this study
Pparg
NM_011146
This study 0 RelA, this study
- RelB, this study
Ralgds *
NM_009058
Lo et al., 2007 [22] Mode of regulation uncertain: RelA either alone, or together with RelB enhances Ralgds expression.
Enpp2 *
NM_015744
Huber et al., 2005 [27] + RelA, this study
0 RelB, this study
Birc3
NM_007464
This study + RelA, this study
0 RelB, this study
Cxcl10/IP10
NM_021274
Lukashev et al., 2006 [34] + RelA, this study
0 RelB, this study
Irf1
NM_008390
Kutsch et al., 2008 [41] + RelA, this study
0 RelB, this study
Cd74
NM_010545
This study + RelA, this study
0 RelB, this study
Fosl1
NM_010235
This study - RelA, this study
0 RelB, this study
Nfkb2
NM_019408.1
Dejardin et al., 2002 [5]
Derudder et al., 2003 [6]
+ RelA, Dejardin et al., 2002 [5]
+ RelB, this study
Ccl2/MCP1
NM_011333
Derudder et al., 2003 [6] + RelA, this study
+ RelB, this study
Nfkbia/IκBα
NM_010907
Bonizzi et al., 2004 [31] + RelA, this study
+ RelB, this study
Ccl7/MCP3
NM_013654
This study + RelA, this study
+ RelB, this study
Cxcl1/KC
NM_008176
This study + RelA, this study
Positive regulation by RelB is uncertain.
Id2
NM_010496
This study - RelA, this study
- RelB, this study
  1. Genes that are discussed in chapter "Meta analysis of LTβR-dependent transcriptomes" are indicated by an asterisk and genes that are discussed in chapter "Verification of microarray results by qRT-PCR" are listed in bold.
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