Differential RelA- and RelB-dependent gene transcription in LTβR-stimulated mouse embryonic fibroblasts

BMC Genomics

Table 4 Gene Ontology analysis of category I/2

GO number	GO term	Type of biological process	p value	n sel.	n tot.
GO:0007049	Cell cycle	CCY	3.10E-07	24	559
GO:0006259	DNA metabolic process	CCY	9.50E-07	21	469
GO:0022402	Cell cycle process	CCY	7.00E-06	19	447
GO:0022403	Cell cycle phase	CCY	2.40E-05	12	211
GO:0051301	Cell division	CCY	3.90E-05	11	187
GO:0000278	Mitotic cell cycle	CCY	0.00011	10	175
GO:0006730	One-carbon compound metabolic process		0.00022	6	65
GO:0006468	Protein amino acid phosphorylation		0.00025	17	487
GO:0006260	DNA replication	CCY	0.00055	7	107
GO:0000279	M phase	CCY	0.00057	9	176
GO:0016310	Phosphorylation		0.00076	17	536
GO:0009953	Dorsal/ventral pattern formation		0.001	4	34
GO:0040029	Regulation of gene expression, epigenetic		0.0014	4	37
GO:0007067	Mitosis	CCY	0.0015	7	126
GO:0000087	M phase of mitotic cell cycle	CCY	0.0015	7	127
GO:0043543	Protein amino acid acylation		0.0016	3	18
GO:0007224	Smoothened signaling pathway		0.0038	3	24
GO:0006913	Nucleocytoplasmic transport		0.004	5	79
GO:0051169	Nuclear transport		0.004	5	79
GO:0007178	Transmembrane receptor protein serine/threonine kinase signaling pathway		0.0083	4	60
GO:0022613	Ribonucleoprotein complex biogenesis and assembly		0.0093	6	135
GO:0035295	Tube development		0.0096	6	136

GO analysis was performed the same way as for category "total wild-type" described in Table 1 legend. CCY, cell cycle.

ISSN: 1471-2164