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Table 6 Overview of the recognition pattern of different mechanism potentially generating SSR-couples

From: Survey of microsatellite clustering in eight fully sequenced species sheds light on the origin of compound microsatellites

proposed origin

overrepresentation

conformation

motif length

motif similarity

chance (c)

none (low)

balanced

none required

none required

recombination (r)

medium

unbalanced – minus

equal

reverse complement

slippage (s)

high

unbalanced

equal (stepwise equal)

high