Library Data | BAC Alignment Data | |||||
---|---|---|---|---|---|---|
HMPR ZMMB1 Library2 | Enzyme | Digestion | Reads | Paired Hits | Avg Span (kb) | Avg % Masked 3 |
Ha | HpyCH4 IV | 10 U/ug | 171 | 27 | 3.1 | 28% |
Hb | HpyCH4 IV | 0.1 U/ug | 181 | 26 | 2.7 | 19% |
Hc | HpaII | 10 U/ug | 734 | 120 | 3.5 | 28% |
Hd | HpaII | 0.5 U/ug | 1482 | 278 | 3.5 | 25% |
He | HpaII | 0.25 U/ug | 5189 | 913 | 3.3 | 27% |
Hf | HpaII | 0.125 U/ug | 10428 | 1838 | 3.1 | 25% |
Hg | HpaII | 0.05 U/ug | 1488 | 246 | 3.2 | 27% |
Hh | HpaII | 0.025 U/ug | 177 | 19 | 3.1 | 19% |
Hi | HpaII | 0.0125 U/ug | 174 | 22 | 2.6 | 18% |
Hj | HpaII | 0.005 U/ug | 177 | 34 | 2.9 | 38% |
Hk | HpaII | 0.00125 U/ug | 183 | 29 | 2.4 | 37% |
Hl | HpyCH4 IV | 0.5 U/ug | 1441 | 112 | 2.2 | 31% |
Hm | HpyCH4 IV | 0.25 U/ug | 2239 | 239 | 3.0 | 36% |
Hn | HpyCH4 IV | 0.125 U/ug | 1492 | 239 | 3.0 | 34% |
Ho | HpyCH4 IV | 0.05 U/ug | 2550 | 492 | 1.9 | 21% |
Hp | HpyCH4 IV | 0.025 U/ug | 8218 | 1483 | 3.0 | 22% |
Hq | HpyCH4 IV | 0.0125 U/ug | 1782 | 329 | 2.9 | 25% |
Hr | HpyCH4 IV | 0.005 U/ug | 1544 | 262 | 2.3 | 23% |
Hs | HpyCH4 IV | 0.002 U/ug | 649 | 115 | 2.3 | 29% |
Total | Â | Â | 40299 | 6865 | 3.0 | 26% |
MSLL ZMMB1 Library | Enzyme | Length (kb) | Reads | Paired hits | Avg Span (kb) | Avg % Masked3 |
La | SalI | 35–60 | 7536 | 93 | 46 | 78% |
Lb | HpaII | 35–60 | 8733 | 146 | 39 | 82% |
Lc | HpaII | 20–35 | 9639 | 483 | 26 | 78% |
Ld | SalI | 20–35 | 10916 | 469 | 24 | 56% |
Le | HpaII | 12–20 | 8920 | 630 | 15 | 65% |
Lf | SalI | 60–100 | 5436 | 10 | 80 | 78% |
Lh | SalI | >100 | 6158 | 0 | n/a | n/a |
Li | HpaII | 60–100 | 8495 | 21 | 70 | 86% |
Lj | HpaII | >100 | 7715 | 0 | n/a | n/a |
Lz | HpaII | 7–12 | 7184 | 807 | 11 | 55% |
Total – Hpa |  |  | 50,686 | 2087 |  | 66% |
Total – Sal |  |  | 30,046 | 572 |  | 60% |
Total | Â | Â | 80,732 | 2659 | Â | 65% |