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Figure 7 | BMC Genomics

Figure 7

From: All and only CpG containing sequences are enriched in promoters abundantly bound by RNA polymerase II in multiple tissues

Figure 7

A) Fraction of promoters that contain particular sequences between -200 bp and TSS: 1) CpG island, 2) two or more of six CpG containing motifs (SP1: CCCGCC, CCGCCC, CGCCCC; ETS: CCGGAA, GCGGAA; NRF-1:CGCATGCG, CGCGTGCG, CGCCTGCG; BoxA: TCTCGCG, CTCGCGA; CRE: ACGTCA; E-Box: CACGTG), 3) three or more of the six motifs. B) Fraction of promoters that contain particular motifs: top 20% of common RNAP promoters (Const), liver specific (LS), heart ventricle specific (HS), and keratinocyte specific (KS) promoters. Average RNAP binding for each class is presented.

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BMC Genomics

ISSN: 1471-2164

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