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Table 1 Differentially expressed genes in the mouse liver after fasting (Sterolgene v0 microarray). Differentially expressed genes in the mouse liver after fasting as detected by the Sterolgene array (α = 0.05).

From: The Sterolgene v0 cDNA microarray: a systemic approach to studies of cholesterol homeostasis and drug metabolism

Gene name and function

Gene symbol

Log2 ratio

GeneBank Acc. No.

Cholesterol biosynthesis

   

   Acetyl-CoA acetyltransferase 2

Acat2

-1.13

NM_009338

   Mevalonate kinase

Mvk

-0.56

NM_023556

   Lanosterol 14α-demethylase

Cyp51a1

-1.32

BC031813

   Sterol-C4-methyl oxidase-like

Sc4mol

-2.05

NM_025436

   NAD(P) dependent steroid

Nsdhl

-1.47

BC019945

   dehydrogenase-like

   

   Sterol C5 desaturase

Sc5d

-1.75

BC024132

Bile acid biosynthesis

   

   Sterol 12α-hydroxylase

Cyp8b1

0.49

NM_010012

Cytochrome P450 superfamily

   

   Cytochrome P450, 1a2

Cyp1a2

-1.35

NM_009993

   Cytochrome P450, 3a25

Cyp3a25

-0.78

BC028855

   Cytochrome P450, 3a41

Cyp3a41

-1.91

NM_017396

   Cholesterol side chain cleavage enzyme

Cyp11a1

0.41

NM_019779

   Retionic acid hydrolase

Cyp26a1

-0.83

NM_007811

Nuclear receptor superfamily

   

   Peroxisome proliferator-activated

Nr1c1

-1.03

NM_011144

   receptor alpha

   

   Retinoic acid-related orphan

Nr1f3

-0.60

NM_011281

   receptor gamma

   

   Retinoic acid-related orphan

Nr1f1

-0.54

NM_013646

   receptor alpha

   

   Liver X receptor beta

Nr1h2

-0.46

NM_009473

   Constitutive androstane receptor

Nr1i3

0.22

NM_009803

Transcription factors

   

   Sterol regulatory element binding transcription factor 2

Srebp2

-0.60

NM_033218

   CCAAT/enhancer binding protein alpha

Cebpa

-0.38

BC028890

   Transcription factor 1

Tcf1

0.17

NM_009327

Other

   

   Peptidylprolyl isomerase A

Ppia

-0.65

NM_008907

   Organic anion transporter 1

Slco1a1

-0.55

AY195868

   Delta-aminolevulinate synthase 1

Alas1

0.98

NM_020559

  1. Genes in bold – RT-PCR analysis is consistent with microarray data. Cyp3a41 probe cross-hybridizes with Cyp3a11.
  2. Note. Three mice were used in this experiment.