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Table 4 Differentially expressed genes in the mouse liver after cholesterol feeding (Sterolgene v0 microarray). Differentially expressed genes in the mouse liver after cholesterol feeding as detected by the Sterolgene array (α = 0.1).

From: The Sterolgene v0 cDNA microarray: a systemic approach to studies of cholesterol homeostasis and drug metabolism

Gene name and function

Gene symbol

Log2 ratio

GeneBank Acc. No.

Cholesterol biosynthesis

   Acetyl-Coenzyme A synthetase 2

Acas2

-2.35

NM_019811

   Phosphomevalonate kinase

Pmvk

-1.18

NM_026784

   Farnesyl diphosphate farnesyl transferase 1

Fdft1

-2.46

NM_010191

   Squalene epoxidase

Sqle

-2.47*

BC042781

   Lanosterol 14α-demethylase

Cyp51a1

-1.90

BC031813

   NAD(P) dependent steroid dehydrogenase-like

Nsdhl

-2.06*

BC019945

Bile acids biosynthesis

   Cholesterol 7α-hydroxylase

Cyp7a1

-1.44*

NM_007824

   Cytochrome P450, 7b1

Cyp7b1

-2.01*

BC038810

Cholesterol transport

   LDL receptor adaptor protein 1

Ldlrap1

0.76

NM_145554

   Sterol carrier protein 2

Scp2

1.09*

BC018384

Nuclear receptor superfamily

   Small heterodimeric partner

Nr0b2

0.94*

NM_011850

   Testis receptor

Nr2c1

0.60*

NM_011629

   Glucocorticoid receptor

Nr3c1

0.83*

NM_008173

Cytochrome P450 superfamily – xenobiotic metabolism

   Cytochrome P450, 2g1

Cyp2g1

1.09

NM_013809

   Cytochrome P450, 3a41

Cyp3a41

1.92

NM_017396

  1. Genes in bold – RT-PCR analysis is consistent with microarray data.
  2. *α = 0.05. Cyp3a41 probe cross-hybridizes with Cyp3a11.
  3. Note. Two mice were used in this experiment.