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Table 1 NsLtp genes identified in the Oryza sativa subsp. japonica genome and features of the deduced proteins. Identical proteins refer to their relative redundant form. A cluster of tandem duplication repeats is indicated by a vertical line before the gene names (see also Figure 1).

From: Genome-wide analysis of the rice and arabidopsis non-specific lipid transfer protein (nsLtp) gene families and identification of wheat nsLtp genes by EST data mining

nsLtp gene locus/model intron signal peptide mature protein
   bp AA AA MM pI a
Type I       
OsLtpI.1 Os01g12020.1 103 24 99 10212 4.36
OsLtpI.2 Os01g60740 b 86 27 93 9464 10.55
OsLtpI.3 Os03g59380.1 94 33 91 9085 12.07
OsLtpI.4 Os05g40010.1 372 30 99 9780 12.05
OsLtpI.5 Os06g06340.1 100 28 98 10069 9.84
OsLtpI.6 Os06g34840.1 2740 27 120 12297 3.92
OsLtpI.7 Os08g03690.1 547 27 93 9621 9.90
|OsLtpI.8 Os11g02330 c 106 27 92 9336 10.25
|OsLtpI.9 Os11g02350.1 90 28 93 9437 10.89
|OsLtpI.10 Os11g02379.1 d 114 25 91 8895 11.81
|OsLtpI.11 Os11g02379.2 89 26 92 8916 10.55
|OsLtpI.12 Os11g02400.1 106 26 92 9031 11.50
|OsLtpI.13 Os11g02424.2 709 26 92 9104 11.50
OsLtpI.14 Os11g24070.1 116 25 92 9147 12.20
|OsLtpI.15 Os12g02290.1 133 27 OsLTPI.8
|OsLtpI.16 Os12g02300.1 90 OsLTPI.9
|OsLtpI.17 Os12g02310.1 102 25 92 8930 10.55
|OsLtpI.18 Os12g02320.1 138 25 91 8909 11.81
|OsLtpI.19 Os12g02330.1 106 26 OsLTPI.12
|OsLtpI.20 Os12g02340.1 713 26 OsLTPI.13
Type II       
|OsLtpII.1 Os01g49640.1 none 26 77 8119 11.98
|OsLtpII.2 Os01g49650.1 none 36 76 7987 11.28
OsLtpII.3 Os03g02050.1 none 20 76 7549 11.90
OsLtpII.4 Os05g47700.1 none 27 67 7066 10.16
OsLtpII.5 Os05g47730.1 none 27 69 7270 10.66
OsLtpII.6 Os06g49190.1 none 27 67 6967 10.64
|OsLtpII.7 Os10g36070.1 none 26 74 7613 9.84
|OsLtpII.8 Os10g36090.1 none 26 74 7659 9.84
|OsLtpII.9 Os10g36100 e none 26 75 7774 9.84
|OsLtpII.10 Os10g36110.1 none 25 75 7926 9.84
|OsLtpII.11 Os10g36160.1 none 25 69 7382 7.06
|OsLtpII.12 Os10g36170.1 none 24 67 6890 11.90
OsLtpII.13 Os11g40530.1 none 36 74 7665 12.14
Type III       
OsLtpIII.1 Os08g43290.1 84 26 68 6744 7.84
OsLtpIII.2 Os09g35700.1 107 26 69 6839 7.84
Type IV       
|OsLtpIV.1 Os01g68580.1 none 29 82 8908 10.65
|OsLtpIV.2 Os01g68589.1 none 25 78 8291 9.90
OsLtpIV.3 Os07g18750.1 none 28 76 8073 7.84
OsLtpIV.4 Os07g18990.1 none 23 81 8420 9.86
Type V       
OsLtpV.1 Os01g62980.1 97 27 91 9390 12.05
|OsLtpV.2 Os04g33920.1 290 22 94 9608 10.22
|OsLtpV.3 Os04g33930.2 419 26 97 9940 11.28
OsLtpV.4 Os05g06780.1 676 24 93 9497 9.69
Type VI       
|OsLtpVI.1 Os01g58650.1 2851 20 103 10909 4.48
|OsLtpVI.2 Os01g58660.1 92 23 89 9876 9.45
OsLtpVI.3 Os10g05720.2 440 28 81 8724 9.56
OsLtpVI.4 Os11g29420.1 791 29 96 10176 6.00
Type VII       
OsLtpVII.1 Os11g37280.1 595 27 105 10781 5.32
Type VIII       
OsLtpVIII.1 Os06g49770 f 221 30 102 9594 9.79
nsLTPY       
OsLtpY.1 Os03g44000.1 1088 24 109 12073 9.69
OsLtpY.2 Os07g27940.1 148 27 107 10892 11.98
OsLtpY.3 Os11g34660 g 825 27 104 11394 5.50
  1. AA, number of amino acids; MM, molecular mass in Dalton; pI, isoelectric point.
  2. a cysteine residues were not taken into account in the pI calculation.
  3. b using the transcript structure Os01g60740.2.
  4. c annotations curated (strand: +1; exon 1 start: 679124, end: 679473; exon 2 start: 679580, end: 679589).
  5. d annotations curated (strand: +1; exon 1 start: 702105, end: 702445; exon 2 start: 702560, end: 702569).
  6. e annotations curated (strand: +1; exon start: 18974249, end: 18974554).
  7. f annotations curated (strand: +1; exon 1 start: 30113033, end: 30113426; exon 2 start: 30113648, end: 30113652).
  8. g annotations curated (strand: +1; exon 1 start: 19789864, end: 19790209; exon 2 start: 19791035, end: 19791084).
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