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Table 2 NsLtp genes identified in the Arabidopsis thaliana genome and features of the deduced proteins. A cluster of tandem duplication repeats is indicated by a vertical line before the gene names (see also Figure 1).

From: Genome-wide analysis of the rice and arabidopsis non-specific lipid transfer protein (nsLtp) gene families and identification of wheat nsLtp genes by EST data mining

nsLtp gene

locus/model

intron

signal peptide

mature protein

  

bp

AA

AA

MM

pI a

TypeI

      

AtLtpI.1

At2g15050.2

653

25

90

9489

12.13

AtLtpI.2

At2g15325.1

127

27

94

10312

4.83

AtLtpI.3

At2g18370.1

438

24

92

9092

4.36

|AtLtpI.4

At2g38530.1

111

23

95

9661

11.90

|AtLtpI.5

At2g38540.1

none

25

93

9281

11.50

AtLtpI.6

At3g08770.1

94

19

94

9883

9.61

|AtLtpI.7

At3g51590.1

467

24

95

9945

9.61

|AtLtpI.8

At3g51600.1

107

25

93

9891

12.68

AtLtpI.9

At4g33355.1

112

28

91

9514

9.86

AtLtpI.10

At5g01870.1

94

22

94

9923

10.45

|AtLtpI.11

At5g59310.1

138

23

89

8854

10.76

|AtLtpI.12

At5g59320.1

94

23

92

9221

10.76

TypeII

      

|AtLtpII.1

At1g43665 b

none

22

75

8367

9.59

|AtLtpII.2

At1g43666.1

none

19

77

8458

9.67

|AtLtpII.3

At1g43667.1

none

21

77

8488

9.59

AtLtpII.4

At1g48750.1

none

26

68

7258

10.74

AtLtpII.5

At1g66850.1

none

24

78

7970

7.12

AtLtpII.6

At1g73780.1

none

29

69

7674

9.67

AtLtpII.7

At2g14846.1

none

21

78

8386

9.69

AtLtpII.8

At3g12545 c

none

25

64

7206

10.50

AtLtpII.9

At3g18280.1

none

28

68

7372

12.40

AtLtpII.10

At3g29105 d

none

24

70

7841

9.92

AtLtpII.11

At3g57310.1

none

24

79

8504

9.71

|AtLtpII.12

At5g38160.1

none

24

79

8309

5.43

|AtLtpII.13

At5g38170.1

none

24

79

8342

7.12

|AtLtpII.14

At5g38180.1

none

24

71

8127

7.28

|AtLtpII.15

At5g38195.1

none

24

71

7718

4.40

TypeIII

      

AtLtpIII.1

At5g07230.1

120

24

67

6883

4.29

AtLtpIII.2

At5g52160.1

none

32

64

6791

4.64

AtLtpIII.3

At5g62080.1

315

30

65

6636

4.14

TypeIV

      

|AtLtpIV.1

At5g48485.1

none

26

76

7974

4.25

|AtLtpIV.2

At5g48490.1

none

25

76

8078

4.59

|AtLtpIV.3

At5g55410.1

81

30

77

8544

10.35

|AtLtpIV.4

At5g55450.1

none

30

74

7779

9.95

|AtLtpIV.5

At5g55460.1

106

32

77

8303

10.50

TypeV

      

AtLtpV.1

At2g37870.1

96

23

92

9575

12.67

AtLtpV.2

At3g53980.1

99

23

91

9362

9.91

AtLtpV.3

At5g05960.1

88

25

91

9530

10.85

TypeVI

      

AtLtpVI.1

At1g32280.1

258

23

89

9383

9.69

AtLtpVI.2

At4g30880.1

192

22

87

9222

9.91

AtLtpVI.3

At4g33550 e

79

29

86

9283

10.01

AtLtpVI.4

At5g56480.1

150

23

90

9582

4.91

TypeVIII

      

AtLtpVIII.1

At1g70250 f

none

19

90

9865

4.64

Type IX

      

AtLtpIX.1

At3g07450.1

none

29

77

7980

12.16

AtLtpIX.2

At3g52130.1

none

26

99

10484

4.40

nsLTPY

      

AtLtpY.1

At1g52415 g

170

24

92

10825

10.25

AtLtpY.2

At1g64235 h

577

24

94

10313

10.83

AtLtpY.3

At4g08530 i

none

22

104

11859

9.53

AtLtpY.4

At4g28395 j

74, 121 k

20

120

13430

5.28

  1. AA, number of amino acids; MM, molecular mass in Dalton; pI, isoelectric point.
  2. a cysteine residues were not taken into account in the pI calculation.
  3. b annotations curated (strand: -1; exon start: 16455949, end: 16456244).
  4. c annotations curated (strand: -1; exon start: 3977557, end: 3977828).
  5. d annotations curated (strand: +1; exon start: 11082271, end: 11082557).
  6. e annotations curated (strand: +1; exon 1 start: 16134443, end: 16134767; exon 2 start: 16134847, end: 16134869).
  7. f annotations curated (strand: +1; exon start: 26456628, end: 26456958).
  8. g annotations curated (strand: +1; exon 1 start: 19529835, end: 19530183; exon 2 start: 19530354, end: 19530355).
  9. h annotations curated (strand: +1; exon 1 start: 23839912, end: 23840250; exon 2 start: 23840828, end: 23840845).
  10. i annotations curated (strand: +1; exon start: 5421971, end: 5422352).
  11. j annotations curated (strand: +1; exon 1 start: 14044281, end: 14044490; exon 2 start: 14044565, end: 14044734; exon 3 start: 14044856, end: 14044898).
  12. k AtLtpY.4 contains two introns.