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Table 1 Representative genes that displayed significant up- or down-expression in the fur mutant

From: Characterization of the Shewanella oneidensis Fur gene: roles in iron and acid tolerance response

Gene Annotation Ratio (p value)
AlcA siderophore biosynthesis proteinx 13.85 (1.4E-05)
CcmD heme exporter protein CcmD 5.32 (0.01)
ExbB1 TonB system transport protein ExbB1 15.69 (4.6E-04)
ExbD1 TonB system transport protein ExbD1 12.56 (8.5E-04)
FeoA ferrous iron transport protein A 5.96 (0.02)
HmuT hemin ABC transporter, periplasmic hemin-binding protein 4.51 (2.4E-05)
HmuU hemin ABC transporter, permease protein 5.46 (0.003)
HmuV hemin ABC transporter, ATP-binding protein 5.46 (0.002)
HugA heme transport protein 49.79 (4.7E-09)
IrgA iron-regulated outer membrane virulence protein 8.90 (6.0E-04)
SO1482 TonB-dependent receptor, putative 5.39 (1.1E-06)
SO1580 TonB-dependent heme receptor 3.99 (4.1E-04)
SO3031 siderophore biosynthesis protein, putative 3.60 (1.0E-04)
SO3032 siderophore biosynthesis protein, putative 9.14 (1.4E-04)
SO3033 ferric alcaligin siderophore receptor 10.86 (1.2E-04)
SO3063 sodium: alanine symporter family protein 4.16 (1.6E-05)
SO3914 TonB-dependent receptor, putative 3.63 (0.002)
SO4743 TonB-dependent receptor, putative 3.82 (4.7E-04)
TonB1 TonB1 protein 21.92 (1.7E-05)
ViuA ferric vibriobactin receptor 5.73 (2.9E-04)
Bfr1 bacterioferritin subunit 1 0.25 (0.04)
InfA translation initiation factor IF-1 4.32 (0.001)
RplD ribosomal protein L4 6.32 (4.5E-04)
RplK ribosomal protein L11 28.83 (0.001)
RpmA ribosomal protein L27 7.20 (0.005)
RpmF ribosomal protein L32 3.63 (0.02)
RpmH ribosomal protein L34 3.55 (0.02)
RpmI ribosomal protein L35 7.62 (8.3E-04)
SO0401 alcohol dehydrogenase, zinc-containing 6.48 (4.0E-04)
HyaB quinone-reactive Ni/Fe hydrogenase, large subunit 0.23 (0.04)
NqrD-2 NADH: ubiquinone oxidoreductase, Na translocating 0.27 (0.04)
SO1648 cold shock domain family protein 8.10 (0.02)
SO0130 putative protease 0.18 (0.05)
SO2426 DNA-binding response regulator 9.87 (4.2E-04)
SO0295 transcriptional regulator, LysR family 0.15 (0.03)
SO0577 sensory box histidine kinase/response regulator 0.18 (0.03)
SO2374 transcriptional regulator, LysR family 0.19 (0.03)
SO2498 sensory box protein 0.25 (0.04)
SO3059 formate hydrogenlyase transcriptional activator, putative 0.30 (0.05)
Rsd regulator of sigma D 0.30 (0.05)