Table 2 Positional candidate genes for the Fatq2a and Fatq2b QTL
From: Overlapping mouse subcongenic strains successfully separate two linked body fat QTL on distal MMU 2
mm9 | Symbol | HG2D microarray p-value 1 & (tissue) 2 | SNP 3 | Sift 4 | KO Models 5 | |||
|---|---|---|---|---|---|---|---|---|
Chr | Location (Mb) | Prediction | Score | KO | P | |||
2 | 170.56 | Dok5 | -- | -- | -- | -- | -- | -- |
2 | 172.07 | Mc3r | -- | -- | -- | -- | 3 | Bh, G/S, Ob, S |
2 | 172.2 | Cstf1 | -- | rs27646875 | deleterious | 0 | -- | -- |
2 | 172.69 | Bmp7 | -- | -- | -- | -- | 3 | S, G/S, Eg, M/A |
2 | 172.98 | Pck1 | -- | -- | -- | -- | 4 | Ob, M/A, G/S |
2 | 173.03 | Zbp1 | -- | -- | -- | -- | 1 | -- |
2 | 173.34 | 1700021F07Rik | 0.0220(A) | -- | -- | -- | -- | -- |
2 | 173.44 | Ppp4r1l-ps | 0.0035(B) | -- | -- | -- | -- | -- |
2 | 173.51 | Rab22a | ≤0.0001(ABL) | -- | -- | -- | -- | -- |
2 | 173.59 | Vapb | ≤0.017(BL) | -- | -- | -- | -- | -- |
2 | 173.91 | Stx16 | -- | -- | -- | -- | -- | -- |
2 | 173.94 | Npepl1 | ≤0.0050(BL) | -- | -- | -- | -- | -- |
2 | 174.11 | Nespas** | -- | -- | -- | -- | 1 | PL, G/S, Bh |
2 | 174.14 | Gnas | ≤0.0037(AB) | rs28297630 | deleterious | 0.03 | 12 | EL, PL, G/S, Mt, Ob, DA |
rs28297631 | deleterious | 0.01 | ||||||
rs28297633 | deleterious | 0 | ||||||
rs6313545 | deleterious | 0.02 | ||||||
rs6314659 | deleterious | 0 | ||||||
2 | 174.25 | Th1l | -- | -- | -- | -- | -- | -- |
2 | 174.26 | Ctsz | 0.0020(B) | rs16789971 | deleterious | 0.02 | 3 | Tm |
2 | 174.28 | Tubb1 | -- | Â | -- | -- | -- | -- |
2 | 174.29 | Atp5e | ≤ 0.0021(ABL) | rs28261286 | deleterious | 0.01 | -- | -- |
2 | 174.29 | Slmo2 | 0.0800(B) | -- | -- | -- | -- | -- |
2 | 177.75 | Etohi1 | -- | -- | -- | -- | -- | -- |