Table 2 Partial application of various assemblers in different ploidies species
From: Optimal assembly strategies of transcriptome related to ploidies of eukaryotic organisms
Species | Ploidies | Assemblers | References |
|---|---|---|---|
Chickpea | Diploid | Oases | [19] |
Tea plant | Diploid | Soapdenovo | [26] |
Carrot | Diploid | CTDA | [17] |
Camelina sativa | Diploid | Trinity | [27] |
Pasta wheat | Tetraploid | CDTA | [28] |
Nicotiana benthamiana | Tetraploid | CDTA | [18] |
Common wheat | Hexaploid | Trinity | [29] |
Sweetpotato | Hexaploid | Soapdenovo | [30] |
Sweetpotato | Hexaploid | CTDA | [25] |