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Table 3 Comparison of gene expression changes between deep sequencing and qRT-PCR data

From: High-throughput RNA sequencing reveals the effects of 2,2′,4,4′ -tetrabromodiphenyl ether on retina and bone development of zebrafish larvae

Genes RT-PCR Deep sequencing
FC (500) SEM FC (500)
ch25h 4.78 1.21 4.89
LOC799791 1.83 0.44 2.99
rx2 0.43 0.07 0.18
fetub 0.29 0.02 0.25
sesn2 7.71 1.84 6.31
opn1sw1 0.56 0.09 0.20
hsp70 114.91 33.50 111.46
cyp2k6 5.79 0.59 10.15
lepb 24.97 6.24 49.47
pth1a 23.28 3.72 112.61