Figure 2From: Sampled ensemble neutrality as a feature to classify potential structured RNAs Lower alignment quality has small impact on SEN. The effect of alignment quality on SEN. Lower quality alignments simulated by subalignments derived from Dataset3. The delta refers to (d e l t a=full alignment SEN−subalignment SEN). A) Poorer quality alignments have a modest effect on SEN. B) No correlation is observed between the delta SEN and the base-pair distance between the structures derived from the full and subalignments. C) Large changes in relative number of base-pairs (full/subalignment) do affect SEN values.Back to article page