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Table 7 Other cis- regulatory RNA motifs identified in B. methanolicus MGA3 and their respective transcriptional organization and function

From: Transcriptome analysis of thermophilic methylotrophic Bacillus methanolicus MGA3 using RNA-sequencing provides detailed insights into its previously uncharted transcriptional landscape

cis- regulatory RNA motif and its transcriptional organization Related function Locus tag(s)
(PyrR)*-pyrR-pyrP-pyrB-pyrC-pyrAA-pyrAB-pyrK-pyrD-pyrF-pyrE Pyrimidine biosynthesis BMMGA3_05780-BMMGA3_05825
(pan)-panB-panC-panD Biosynthesis of coenzyme A BMMGA3_10610- BMMGA3_10620
(yjdF)-yjdF Unknown function BMMGA3_03360
(yybP-ykoY)(PyrR)-ykoY Membrane protein BMMGA3_14085
(ylbH)§ Unknown function -
  1. *(PyrR) = PyrR binding site; (pan) = pan RNA motif; (yjdF) = yjdF RNA motif; yybP-ykoY = yybP-ykoY RNA motif; (ylbH) = ylbH RNA motif.
  2. §A CDS for a conserved hypothetical protein is located on the opposite strand between the ylbH RNA motif and the next downstream gene.