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Table 4 Summary of annotation of the C. nobilis transcriptome

From: A de novo transcriptome of the noble scallop, Chlamys nobilis, focusing on mining transcripts for carotenoid-based coloration

 

Isotigs (singletons)

≥300 bp

≥1000 bp

Total number of sequences

46,284 (65,386)

70,930

5,849

Sequences with Blast matches against Nr database

13,223 (10,438)

20,434

2,910

Sequences with Blast matches against SwissProt database

9,409 (6,648)

14,234

2,353

Sequences assigned GO terms

5,360 (4,691)

8,463

1,202

ESTs assigned with EC numbers

2,054 (1,221)

2,992

538