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Table 1 Summary data for redband trout samples including strain (LJ = Little Jacks Cr., K = Keithley Cr., LJxK = F1 crosses), temperature treatment (28°C treatment or 15°C control), sample day, sequencing reads (M = millions), and reference alignment statistics (transcriptome is abbreviated in column heading as Transc.)

From: Transcriptomic response to heat stress among ecologically divergent populations of redband trout

       Mean   Mean
     Quality Transcr. Match (M)/ Transc. Match (%)/
Sample* Strain Temp Day Reads (M) Match (M) Strain Match (%) Strain
1 LJ Trt-28C 1 28.1 4.6 7.0 16.2 23.1
2 LJ Trt-28C 1 31.3 8.2   26.2  
3 LJ Trt-28C 1 30.1 8.1   26.8  
4 LJ x K Trt-28C 1 30.4 12.1 12.5 39.8 40.9
5 LJ x K Trt-28C 1 27.6 11.6   42.1  
6 LJ x K Trt-28C 1 33.6 13.7   40.9  
7 K Trt-28C 1 32.4 13.1 12.1 40.4 40.3
8 K Trt-28C 1 31.4 13.4   42.5  
9 K Trt-28C 1 25.9 9.9   38.0  
10 LJ Trt-28C 3 40.6 14.1 10.8 34.7 30.2
11 LJ Trt-28C 3 34.8 9.8   28.3  
12 LJ Trt-28C 3 30.5 8.4   27.7  
13 LJ x K Trt-28C 3 31.3 9.1 9.0 29.0 26.1
14 LJ x K Trt-28C 3 30.2 6.9   23.0  
15 LJ x K Trt-28C 3 41.7 10.9   26.3  
16 K Trt-28C 3 27.3 9.6 7.0 35.2 24.4
17 K Trt-28C 3 28.3 7.6   27.0  
18 K Trt-28C 3 34.3 3.8   11.0  
19 LJ Trt-28C 7 29.3 12.4 9.1 42.4 29.2
20 LJ Trt-28C 7 31.5 9.4   29.9  
21 LJ Trt-28C 7 35.1 5.4   15.5  
22 LJ x K Trt-28C 7 28.5 10.8 10.5 37.9 38.2
23 LJ x K Trt-28C 7 26.4 9.9   37.6  
24 LJ x K Trt-28C 7 28.0 10.9   39.1  
25 K Trt-28C 7 37.4 6.8 5.2 18.2 16.6
26 K Trt-28C 7 28.7 5.0   17.3  
27 K Trt-28C 7 27.8 4.0   14.2  
28 LJ Trt-28C 28 22.8 6.4 5.6 28.2 20.6
29 LJ Trt-28C 28 31.2 7.5   24.0  
30 LJ Trt-28C 28 29.6 2.8   9.6  
31 LJ x K Trt-28C 28 43.0 0.5 3.7 1.1 14.9
32 LJ x K Trt-28C 28 24.1 4.1   16.9  
33 LJ x K Trt-28C 28 24.3 6.4   26.5  
34 K Trt-28C 28 26.4 6.3 6.0 23.7 23.0
35 K Trt-28C 28 25.4 7.3   28.7  
36 K Trt-28C 28 26.8 4.5   16.6  
37 LJ Con-15C 1 23.8 7.4 6.9 31.2 27.0
38 LJ Con-15C 1 24.7 6.7   27.3  
39 LJ Con-15C 1 29.4 6.6   22.5  
40 LJ x K Con-15C 1 25.0 6.5 10.2 25.9 25.0
41 LJ x K Con-15C 1 65.0 15.3   23.5  
42 LJ x K Con-15C 1 34.2 8.7   25.6  
43 K Con-15C 1 22.4 5.3 6.9 23.7 26.0
44 K Con-15C 1 27.1 8.3   30.6  
45 K Con-15C 1 29.6 7.0   23.7  
46 LJ Con-15C 3 24.2 8.1 5.4 33.5 19.7
47 LJ Con-15C 3 34.4 3.7   10.9  
48 LJ Con-15C 3 30.0 4.4   14.8  
49 LJ x K Con-15C 3 46.3 0.7 3.3 1.6 11.1
50 LJ x K Con-15C 3 27.0 3.6   13.4  
51 LJ x K Con-15C 3 30.6 5.6   18.4  
52 K Con-15C 3 26.7 8.3 5.8 31.0 21.2
53 K Con-15C 3 28.0 4.3   15.4  
54 K Con-15C 3 28.5 4.9   17.1  
55 LJ Con-15C 7 24.3 7.1 6.0 29.4 24.0
56 LJ Con-15C 7 26.2 7.0   26.9  
57 LJ Con-15C 7 25.0 4.0   15.9  
58 LJ x K Con-15C 7 33.2 6.7 4.3 20.2 13.8
59 LJ x K Con-15C 7 32.6 2.9   8.9  
60 LJ x K Con-15C 7 27.3 3.4   12.4  
61 K Con-15C 7 25.6 5.0 10.8 19.4 23.4
62 K Con-15C 7 27.8 5.9   21.0  
63 K Con-15C 7 72.7 21.7   29.9  
64 LJ Con-15C 28 35.0 12.5 9.5 35.6 25.9
65 LJ Con-15C 28 41.1 7.1   17.4  
66 LJ Con-15C 28 36.1 8.9   24.6  
67 LJ x K Con-15C 28 31.5 5.9 8.3 18.6 21.2
68 LJ x K Con-15C 28 54.7 7.1   12.9  
69 LJ x K Con-15C 28 37.3 11.9   32.1  
70 K Con-15C 28 44.4 0.3 4.9 0.7 13.4
71 K Con-15C 28 41.5 6.9   16.5  
72 K Con-15C 28 32.3 7.4   22.9  
mean -- -- -- 31.96 7.53 7.5 24.1 24.1
  1. *Each sample includes 3 pooled RNA samples from the same rearing tank.
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