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Figure 4 | BMC Genomics

Figure 4

From: Deep RNA sequencing reveals a high frequency of alternative splicing events in the fungus Trichoderma longibrachiatum

Figure 4

Characteristics of predicted splicing junctions (SJs). (A) Venn diagrams of SJs predicted based on PDB library, MSM library, and pooled PDB + MSM libraries. (B) Venn diagrams of SJs based on the fggw set of gene models and those based on RNA-Seq. (C) Sequence logos of 5’ splice site (left), branch site (middle), and 3’ splice site (right) sequence of introns. Logos were created using WebLogo 3 [30]. (D) Distribution of lengths of introns based on RNA-Seq. (E) The relation between the branch point A offset from 5’ splice site and the intron length.

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BMC Genomics

ISSN: 1471-2164

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