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Figure 6 | BMC Genomics

Figure 6

From: Deep RNA sequencing reveals a high frequency of alternative splicing events in the fungus Trichoderma longibrachiatum

Figure 6

Features of alternative spliced introns. (A-E) Length (A), GC content (B), 5’ss score (C), 3’ss score (D), and branching site score (E) distribution of different types of introns. IC, constitutive introns; IR, retained introns; IA-IR, alternatively spliced introns except retained introns. (F) Number of constitutive introns (IC) and retained introns (IR) in each intron retention ratio bin. (G-K) Length (G), GC content (H), 5’ss score (IC), 3’ss score (J), and branching site score (K) distribution of constitutive introns (IC) and retained introns (IR) in each intron retention ratio bin. Scores of 5’ss, 3’ss, and branching site sequences were calculated according Sheth et al. [36] and raw scores are presented here.

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BMC Genomics

ISSN: 1471-2164

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