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Table 1 General features of thirteen M. tuberculosis genomes

From: Comparing Mycobacterium tuberculosis genomes using genome topology networks

Strain
( M. tuberculosis )
Gene Bank ID Source CDSs Added genes CDSs after refinement COG annotated \( \frac{\boldsymbol{COGs}}{\boldsymbol{CDSs}} \) (%) orthoMCL Annotated \( \frac{\mathbf{Orthologs}}{\mathbf{CDSs}} \) (%)
CCDC5079 NC_021251.1 CHN 4,156 249 4,405 2,880 65.38 4,156 94.35
CCDC5180 NC_017522.1 CHN 3,590 813 4,403 2,862 65.00 4,111 93.37
CDC1551 NC_002755.2 USA 4,189 126 4,315 2,762 64.01 4,018 93.12
CTRI 2 NC_017524.1 RUS 3,944 427 4,371 2,849 65.18 4,139 94.69
F11 NC_009565.1 ZA 3,941 442 4,383 2,862 65.30 4,141 94.48
H37Ra NC_009525.1 - 4,034 372 4,406 2,866 65.05 4,168 94.60
H37Rv NC_000962.3 - 4,111 372 4,483 2,867 63.95 4,158 92.75
KZN 1435 NC_012943.1 ZA 4,059 325 4,384 2,859 65.21 4,148 94.62
KZN 4207 NC_016768.1 ZA 3,996 376 4,372 2,851 65.21 4,136 94.60
KZN 605 NC_018078.1 ZA 4,001 349 4,350 2,835 65.17 4,122 94.76
RGTB327 NC_017026.1 IN 3,691 325 4,016 2,459 61.23 3,594 89.49
RGTB423 NC_017528.1 IN 3,622 271 3,893 2,379 61.11 3,462 88.93
UT205 NC_016934.1 COL 3,796 433 4,229 2,778 65.69 4,011 94.85
  1. Source: The strain information was acquired from NCBI. CHN: China, USA: America, RUS: Russia, ZA: South Africa, IN: India, COL: Colombia. H37Ra and H37Rv were derived from the original human-lung H37 isolate in 1934 and have been used extensively in biomedical research.