Table 2 COG groups with the highest DDs
From: Comparing Mycobacterium tuberculosis genomes using genome topology networks
COG ID | Annotation | DD/Str. | Paralog/Str. | DD/Paralog |
|---|---|---|---|---|
COG2963 | Transposase and inactivated derivatives | 24 | 14 | 1.71 |
COG2801 | Transposase and inactivated derivatives | 28 | 18 | 1.56 |
COG3547 | Transposase and inactivated derivatives | 6 | 6 | 1.00 |
COG3328 | Transposase and inactivated derivatives | 5 | 9 | 0.56 |
COG5651 | PPE-repeat proteins | 31 | 62 | 0.50 |
COG2114 | Adenylate cyclase, family 3 (some proteins contain HAMP domain) | 6 | 12 | 0.50 |
COG0515 | Serine/threonine protein kinase | 5 | 11 | 0.45 |
COG1680 | Beta-lactamase class C and other penicillin-binding proteins | 5 | 11 | 0.45 |
COG0277 | FAD/FMN-containing dehydrogenases | 6 | 14 | 0.43 |
COG2409 | Predicted drug exporters of the RND superfamily | 6 | 14 | 0.43 |
COG3321 | Polyketide synthase modules and related proteins | 8 | 19 | 0.42 |
COG1024 | Enoyl-CoA hydratase/carnitine racemase | 9 | 23 | 0.39 |
COG0657 | Esterase/lipase | 5 | 13 | 0.38 |
COG0596 | Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) | 12 | 34 | 0.35 |
COG3315 | O-Methyltransferase involved in polyketide biosynthesis | 6 | 17 | 0.35 |
COG1309 | Transcriptional regulator | 17 | 49 | 0.35 |
COG0318 | Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II | 11 | 32 | 0.34 |
COG1960 | Acyl-CoA dehydrogenases | 12 | 35 | 0.34 |
COG2141 | Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases | 6 | 19 | 0.32 |
COG2124 | Cytochrome P450 | 6 | 20 | 0.30 |
COG0477 | Permeases of the major facilitator superfamily | 8 | 27 | 0.30 |
COG1848 | Predicted nucleic acid-binding protein, contains PIN domain | 5 | 19 | 0.26 |
COG0500 | SAM-dependent methyltransferases | 9 | 37 | 0.24 |
COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 9 | 41 | 0.22 |