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Table 2 The most frequent microsatellite motifs found in the giant panda genome sequences

From: Genome-wide survey and analysis of microsatellites in giant panda (Ailuropoda melanoleuca), with a focus on the applications of a novel microsatellite marker system

 

Repeat motifs

Mono-

Di-

Tri-

Tetra-

Penta-

Hexa-

 

A(95.41)

AC(45.27)

AAT(29.77)

AAAT(42.03)

AAACA(31.76)

AAACAA(21.44)

A.melanoleuca

C(4.59)

AG(44.48)

AAC(29.19)

AAAG(16.73)

AAAGA(20.71)

AAAGAA(9.5)

 

—

AT(10.04)

AAG(9.64)

AAAC(7.71)

AAATA(20.27)

AGAGGG(7.53)

 

—

CG(0.21)

AGG(8.55)

AAGG(7.63)

AAAGG(5.52)

AGATAT(7.27)