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Table 1 Output statistics of sequencing and assembly

From: Transcriptome sequencing and analysis of the entomopathogenic fungus Hirsutella sinensis isolated from Ophiocordyceps sinensis

Samples 3d 6d 9d All
Reads     
Number of reads 26,577,780 27,355,558 33,619,376  
Read size (nt/read) 90 90 75  
Total nucleotides (nt) 2,392,000,200 2,462,000,220 2,521,453,200  
Q20 percentage (%) 89.46 89.66 86.08  
N percentage (%) 0.01 0.00 0.00  
GC percentage (%) 58.19 57.92 57.00  
Contigs     
Number of contigs 165,480 142,072 44,112  
Mean size of contigs 178 191 386  
Length of all contigs (nt) 29,423,650 27,169,112 17,023,492  
Scaffolds     
Number of scaffolds 35,516 35,448 21,757  
Mean size of scaffolds 524 520 776  
Length of all scaffolds (nt) 18,593,527 18,426,448 16,891,810  
Unigenes     
Number of unigenes 25,511 25,214 16,245 20,822
Mean size of unigenes 681 682 994 1,013
Length of all unigenes 17,383,818 17,203,586 16,152,293 21,085,467