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Table 2 Comparison of proteases and genes related with bacteriocin in the Prevotella intermedia strains

From: Comparative genome analysis of Prevotella intermedia strain isolated from infected root canal reveals features related to pathogenicity and adaptation

a. The specific proteases of the Prevotella intermedia strains. Note the genes involved in bacteriocin

Pi ZT

Pi 17

Pi ATCC 25611

Annotation

107096

-

-

Peptidase S41

108006

-

-

CAAX protease

108029

-

-

Hypothetical protein

114036

-

-

Peptidase M23

118026

-

-

DJ-1/PfpI family protein

126005

-

-

ATP-dependent serine protease

134012

-

-

Hypothetical protein

134014

-

-

Hypothetical protein

139007

-

-

Peptidase

142001

-

-

Bacteriocin

142003

-

-

Peptidase inhibitor I9 domain protein

142004

-

-

Bacteriocin

-

387131655

-

Putative bacteriocin

-

387131961

-

Putative bacteriocin

-

387132117

-

Putative caudovirus prohead protease

-

387132819

-

Putative caudovirus prohead protease

-

387133830

-

Hypothetical protein PIN17_A1967

-

387132710

-

Peptidase, M23 family

-

-

2515938070

ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

-

-

2515938139

Hypothetical protein

-

-

2515938401

Hypothetical protein

-

-

2515939618

Membrane-bound metallopeptidase

-

-

2515939771

ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

-

-

2515940199

Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

b. The genes involved in bacteriocin in the Prevotella intermedia strains

103143

387132014

2515939098

Lantibiotic ABC transporter

120031; 140001; 141001

-

2515939774; 2515938065

ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

-

-

2515938070

ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

-

-

2515939771

ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

120005

387131983; 387131657

2515939795; 2515939797

Bacteriocin/Subtilisin-like serine proteases

-

387131961

-

Putative bacteriocin

-

387131655

-

Putative bacteriocin

142001

-

-

Bacteriocin

142002

-

-

Bacteriocin

142004

-

-

Bacteriocin