Genome analysis of Flaviramulus ichthyoenteri Th78T in the family Flavobacteriaceae: insights into its quorum quenching property and potential roles in fish intestine

Table 1 General features of F. ichthyoenteri Th78 ^T , G. saemankumensis DSM 17032 ^T and Lacinutrix sp. 5H-3-7-4 [22]

Strains	Th78 ^T	DSM 17032 ^T	5H-3-7-4
Size (bp)	3,953,230	3,089,149	3,296,168
G + C mol%	32.1%	34.3%	37.2%
Numbers of CDS	3,451	2,688	2,967
DNA coding percentage	90.22%	92.18%	91.64%
Numbers of rRNA	6	6	6
Numbers of tRNA	40	36	39
Major subsystem features predicted by RAST
Cofactors, Vitamins, Prosthetic Groups, Pigments	171	172	153
Cell wall and capsule	129	77	105
Virulence, Disease and Defense	58	61	65
Membrane transport	89	63	53
RNA metabolism	128	125	121
Nucleosides and Nucleotides	78	80	74
Protein metabolism	172	173	167
DNA metabolism	91	83	70
Fatty Acids, Lipids, and Isoprenoids	58	54	72
Nitrogen metabolism	27	28	9
Respiration	46	44	32
Stress response	49	50	51
Amino acids and derivatives	272	259	252
Sulfur metabolism	48	31	6
Phosphorus metabolism	13	12	17
Carbohydrates	256	192	147

ISSN: 1471-2164