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Table 1 General features of F. ichthyoenteri Th78 T , G. saemankumensis DSM 17032 T and Lacinutrix sp. 5H-3-7-4 [22]

From: Genome analysis of Flaviramulus ichthyoenteri Th78T in the family Flavobacteriaceae: insights into its quorum quenching property and potential roles in fish intestine

Strains Th78 T DSM 17032 T 5H-3-7-4
Size (bp) 3,953,230 3,089,149 3,296,168
G + C mol% 32.1% 34.3% 37.2%
Numbers of CDS 3,451 2,688 2,967
DNA coding percentage 90.22% 92.18% 91.64%
Numbers of rRNA 6 6 6
Numbers of tRNA 40 36 39
Major subsystem features predicted by RAST    
 Cofactors, Vitamins, Prosthetic Groups, Pigments 171 172 153
 Cell wall and capsule 129 77 105
 Virulence, Disease and Defense 58 61 65
 Membrane transport 89 63 53
 RNA metabolism 128 125 121
 Nucleosides and Nucleotides 78 80 74
 Protein metabolism 172 173 167
 DNA metabolism 91 83 70
 Fatty Acids, Lipids, and Isoprenoids 58 54 72
 Nitrogen metabolism 27 28 9
 Respiration 46 44 32
 Stress response 49 50 51
 Amino acids and derivatives 272 259 252
 Sulfur metabolism 48 31 6
 Phosphorus metabolism 13 12 17
 Carbohydrates 256 192 147