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Table 1 Primer- and probe sequences of TaqMan assays used for Q-PCR analysis

From: Characterization of a novel RXR receptor in the salmon louse (Lepeophtheirus salmonis, Copepoda) regulating growth and female reproduction

Transcript

Forward primer

Reverse primer

Probe

LsRXR (assay1)

CCTAGTTGAACTCATCGCCAAAATG

TGAAGAGTATGATGGCTCGTAGACA

CCGCTTTGTCCATTTGCAT

LsRXR (assay2)

GCAGAGAAAATCGGGATTGTGTGAT

GCTTCTCTCTTCATTCCCGTATCG

CTGTCGCTATATGAAATGT

LsEcR

ACAAACAAAATGAATGCACAAAGTCCTT

TTAAAAACCGAAAATTGCCCCCATT

ATGTCCCAAATTTCC

Cl333Contig1

CTGCAACTATGCTGAAGACTCTTTG

ATTCAACGGCACCATAGAGAGATG

CCATGCTCTGAATCTC

Cl3250Contig1

CGCTTTGGTGCGCATGA

GGAGACAGACATAAAACTTGGAGCAA

TCGTCTTGCACATCCC

Cl3400Contig1

GCAACCTTGGCATCGATTACAATTA

TGCAAAAGGACCTCGAGATCATTG

CCCCTCTCCACAAACT

LsVit1

ACATCGACTACAAAGGAACTCAGAAC

GGAAGCATGTAACGAATGAACTCA

AGATTTTCTTTAGCTTCTGGATACAAACCTGCTCCA

LsVit2

AATGAGCAATTTAGTTGAGAAAACTTGT

CAATCTCGCTTTGAGCATCACA

TGGATAAATCACGTCAAGTTAGTTACCCTACCGC

LsYAP

GGCTTTAGGCTCTGATGTA AGCA

TGTTCACAAGTAAAAGCAGTGTCATTT

TCAATCACGATGGACCATTCACTGTTTTTG

LseEF1a

CATCGCCTGCAAGTTTAACCAAATT

CCGGCATCACCAGACTTGA

ACGTACTGGTAAATCCAC

  1. The location of the different LsRXR assays (assay 1 and 2) in the gene is shown in Figure 1.