Table 2 Number of detected variants in the pHW197-M sample before and after filtering
From: Analysis of the genetic diversity of influenza A viruses using next-generation DNA sequencing
| Â | Illumina MiSeq | Ion Torrent PGM | ||||||
|---|---|---|---|---|---|---|---|---|
| Â | Before | After a | Before | After a | ||||
| Â | S1 b | S2 b | S1 b | S2 b | S1 b | S2 b | S1 b | S2 b |
SNP c | 4 | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
Insertion | 0 | 0 | 0 | 0 | 14 | 12 | 3 | 1 |
Deletion | 0 | 2 | 0 | 1 | 71 | 66 | 3 | 4 |