Table 1 Number of CGIs in each genomic position showing HM and LM in H1 and IMR90 cells
From: Factors to preserve CpG-rich sequences in methylated CpG islands
H1 | IMR90 | ||||
|---|---|---|---|---|---|
LM (≤20%) | HM (≥80%) | LM (≤20%) | HM (≥80%) | ||
5'CGI | coding | 10733 | 985 | 10762 | 677 |
non-coding | 355 | 224 | 358 | 163 | |
3'CGI | coding | 455 | 1047 | 459 | 894 |
non-coding | 61 | 74 | 67 | 52 | |
Intragenic CGI | coding | 862 | 2481 | 873 | 2045 |
non-coding | 98 | 79 | 93 | 53 | |
Intergenic CGI | non-coding | 1505 | 1367 | 1643 | 731 |
Total | 14069 | 6257 | 14255 | 4615 | |