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Table 1 Summary of the sequence assembly after Illumina sequencing

From: Comparative analysis of the silk gland transcriptomes between the domestic and wild silkworms

Sample name Raw reads Clean reads Clean bases (Gb) Error rate (%) Q20 (%) Q30 (%) GC content (%)
D_CH_1 28689935 27351142 2.74 0.04 97.24 91.56 50.89
D_CH_2 28689935 27351142 2.74 0.06 94.32 86.63 50.98
D_CY_1 29857247 28748042 2.87 0.03 97.66 92.56 48.77
D_CY_2 29857247 28748042 2.87 0.05 95.17 88.2 48.87
W_AKBH_1 27042449 25978481 2.6 0.04 96.9 90.75 52.46
W_AKBH_2 27042449 25978481 2.6 0.06 94.03 86.19 52.96
W_AKSQ_1 31530647 30344925 3.03 0.03 97.66 92.52 49.08
W_AKSQ_2 31530647 30344925 3.03 0.04 95.53 88.91 49.17
  1. The numbers 1 and 2 at the end of the sample name represent left and right ends (pair-end sequencing), respectively. Gb: Giga base; Q20: percentage of bases with a Phred value of at least 20. Q30: percentage of bases with a Phred value of at least 30.