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Table 3 Functional annotation of the differentially expressed genes in domestic versus wild silkworms

From: Comparative analysis of the silk gland transcriptomes between the domestic and wild silkworms

Gene name

Best BLAST hit in nr database; putative function

E-value

Microarray probe

BGIBMGA001622

Uncharacterized protein

6E-54

sw21843

BGIBMGA009199

Organic cation transporter protein-like; excretion of endogenous compounds and xenobiotics [22]

0.0

sw15503

BGIBMGA006745 *

laccase 2A; immune response and/or detoxification [23,24]

0.0

sw12993

BGIBMGA014208

Cytochrome b5; electron transfer component in a number of oxidative reactions [25]

2E-84

sw03099

BGIBMGA010477

Scavenger receptor class B member 4; absorption of carotenoid [26]

0.0

sw01562

BGIBMGA002958

Dopa decarboxylase 2; immune response [27]

0.0

sw15376

BGIBMGA010553

Putative fatty acyl-CoA reductase

2E-58

 

BGIBMGA002577 *

Peroxisomal acyl-coenzyme A oxidase 1-like

0.0

 

BGIBMGA002578 *

Peroxisomal acyl-coenzyme A oxidase 1-like

0.0

sw22703

BGIBMGA010516 *

Glucose dehydrogenase [acceptor]-like

0.0

 

BGIBMGA009925 *

Glucose dehydrogenase [acceptor]-like

0.0

sw21310

Novel00011

No hits

  

BGIBMGA009799 *

Aldose reductase-like isoform X1

0.0

sw19860

BGIBMGA006180 *

Venom dipeptidyl peptidase 4-like isoform X2; immune response [28]

0.0

sw14578

Novel00061

No hits

  

Novel01220

Serine protease inhibitor 16 precursor; immune response [29]

3E-37

 

Novel00917

No hits

  

Novel00523

Uncharacterized protein

2E-63

 

Novel00365

No hits

  

BGIBMGA004037

Hypothetical protein EAG_07492

1E-10

sw04615

Novel00815

Putative pol-like protein

4E-52

sw21903

BGIBMGA003541

Hypothetical protein KGM_18541

3E-169

sw22611

Novel01049

Ubiquitin-like modifier-activating enzyme 5; to activate and transfer ubiquitin to ubiquitin conjugating enzymes [30]

0.0

sw12010

BGIBMGA000013

Osiris 9A

1E-96

sw13441

BGIBMGA013131

Apolipoprotein D-like; transporting lipids and other small hydrophobic molecules for metabolism [31]

1E-154

sw15906

BGIBMGA014207

Cytochrome b5; electron transfer component in a number of oxidative reactions [25]

3E-90

sw08853

BGIBMGA007397

Protein charybde-like

8E-78

sw03416

BGIBMGA013477

Synaptic vesicle glycoprotein 2B-like isoform X1; regulating excretion of proteins [32,33]

0.0

sw21450

BGIBMGA009572

Protein translocase subunit secA; protein export[34]

0.0

 

BGIBMGA000776

Juvenile hormone esterase-like

0.0

 

BGIBMGA010386

Non-lysosomal glucosylceramidase-like; glucosylceramide degradation pathway [35]

0.0

sw07262

BGIBMGA009095

Fungal protease inhibitor F-like isoform X1; immune response [29]

2E-53

sw01309

  1. Up-regulated genes in the domestic strains are shown in bold; up-regulated genes in the wild silkworms are in normal font. *Genes related to oxidoreductase activity in the GO molecular function category. The microarray probes are from Xia et al. [11].