| FDR | |||||
---|---|---|---|---|---|---|
 | Samples |  | 0.01 | 0.05 | 0.10 | 0.20 |
LCL [41] | 13,643 genes and ~2.2 million SNPs in 270 HapMap subjects (CEU, CHB, JPT and YRI populations) | Genes* | 25 (20%) | 49 (14%) | 72 (11%) | 119 (7.4%) |
SNP-gene pairs** | 130 | 182 | 298 | 361 | ||
Liver [35] | 34,266 genes and 782,476 SNPs in liver samples acquired from 427 Caucasian subjects | Genes* | 41 (34%) | 95 (27%) | 169 (25%) | 346 (21%) |
SNP-gene pairs** | 8 | 15 | 20 | 33 | ||
Brain [48] | 22,184 genes and 1,629,853 SNPs in brain tissue samples from 150 Caucasian subjects | Genes* | 17 (14%) | 35 (9.9%) | 63 (9.2%) | 137 (8.5%) |
SNP-gene pairs** | 139 | 191 | 277 | 327 | ||
Skin [46] | 14,500 genes and 438,670 SNPs in skin samples from 57 Caucasian subjects | Genes* | 24 (20%) | 39 (11%) | 59 (8.6%) | 92 (5.7%) |
SNP-gene pairs** | 131 | 92 | 71 | 50 | ||
Ileum [49] | 19,047 genes and 581,633 SNPs in ileum samples from 173 mostly Caucasian subjects | Genes* | 37 (30%) | 83 (24%) | 118 (17%) | 197 (12%) |
SNP-gene pairs** | 176 | 130 | 94 | 58 |