Table 1 Bonferroni significant cis-trans interactions in the liver, pre-frontal cortex and the cerebellum

Liver

rs3129045

6:29652576

rs7761068

6:31333939

HLA-G

9.35 × 10⁻⁷

54.67

rs2747442

6:29653186

rs7761068

6:31333939

HLA-G

2.22 × 10⁻⁵

47.63

rs2747436

6:29651935

rs7761068

6:31333939

HLA-G

2.54 × 10⁻⁵

45.42

Pre-frontal cortex

rs9267873

6:32199352

rs2247056

6:31265490

HLA-DRB5

2.19 × 10⁻⁸

83.34

rs9267873

6:32199352

rs6457374

6:31272261

HLA-DRB5

2.74 × 10⁻⁸

83.10

rs507778

6:32209861

rs6457374

6:31272261

HLA-DRB5

1.57 × 10⁻⁷

−80.99

rs507778

6:32209861

rs2247056

6:31265490

HLA-DRB5

2.32 × 10⁻⁷

−79.75

rs2072633

6:31919578

rs3093998

6:31485174

HLA-DRB5

1.05 × 10⁻⁷

74.74

rs592229

6:31930441

rs3093998

6:31485174

HLA-DRB5

2.09 × 10⁻⁷

72.20

rs805262

6:31628733

rs2247056

6:31265490

HLA-DRB5

2.34 × 10⁻⁶

−70.73

rs805262

6:31628733

rs6457374

6:31272261

HLA-DRB5

3.10 × 10⁻⁶

−70.46

rs2858331

6:32681277

rs3093998

6:31485174

HLA-DRB5

3.24 × 10⁻⁶

−67.31

rs915664

6:30794617

rs3094212

6:31085770

HLA-G

6.56 × 10⁻⁷

63.74

rs13201769

6:30756066

rs2524089

6:31266522

HLA-G

7.48 x 10⁻⁷

−60.37

rs13201769

6:30756066

rs2243868

6:31261276

HLA-G

8.01 × 10⁻⁷

−60.38

rs10947091

6:30747216

rs2524089

6:31266522

HLA-G

9.66 × 10⁻⁷

−60.94

rs10947091

6:30747216

rs2243868

6:31261276

HLA-G

1.05 × 10⁻⁶

−60.91

rs3869070

6:30023868

rs3093998

6:31485714

HLA-G

1.86 × 10⁻⁶

66.69

Cerebellum

rs11744596

5:68519291

rs13168712

5:70679626

LOC100506658

1.52 × 10⁻⁶

−56.61

rs2932777

5:68525027

rs13168712

5:70679626

LOC100506658

1.52 × 10⁻⁶

−56.61