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Table 5 Adaptive immune genes expressed in response to type I IFN treatment and SAV-3 infection in TO-cells

From: De novo assembly and transcriptome analysis of Atlantic salmon macrophage/dendritic-like TO cells following type I IFN treatment and Salmonid alphavirus subtype-3 infection

Family Gene name Accession no Gene ID Fold increase (TO-VS-IFN) Fold increase (TO-VS-SAV3)
Co-upregulated      
 MHC MHC class I a AB162342 Unigene9065 5,56 2,95
  MHC class I b AB162343 Unigene11510 12,67 6,30
 Chemokines C-X-C motif chemokine 10 precursor ACI69209 Unigene8163 26,09 183,97
  C-C motif chemokine 19 precursor ACI67502 CL6894.Contig1 56,60 26,18
  C-X-C chemokine receptor type 3 NP_001133965 Unigene14449 9,19 25,20
 Cytokines IL-2 receptor NP_001134020 Unigene16712 943,36 256,15
  Interleukin-10 receptor beta chain precursor ACI67546 Unigene6317 25,12 13,71
 Humoral IgH locus A GU129139 Unigene6854 6,40 2,54
  IgH locus B GU129140 Unigene10943 14,40 6,83
  pre-B-cell colony-enhancing factor-like NP_997833 Unigene6530 75,82 36,65
Co-downregulated      
 Cytokines Interleukin-12 receptor subunit beta-2-like XP_003452899 CL7886.Contig1 −2,28 −3,75
  Perforin-1-like XP_003446177 Unigene21875 −2,17 −2,23