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Table 6 Apoptosis associated genes expressed in response to type I IFN treatment and SAV-3 infection in TO-cells

From: De novo assembly and transcriptome analysis of Atlantic salmon macrophage/dendritic-like TO cells following type I IFN treatment and Salmonid alphavirus subtype-3 infection

Gene name Gene ID Accession no Fold increase (TO-VS-IFN) Fold increase (TO-VS-SAV3)
Co-upregulated     
 Caspase-1 precursor Unigene6881 ACI68032 5,17 3,01
 Caspase-8-like Unigene9757 XP_001335163 5,60 2,37
 XIAP-associated factor 1 CL3105.Contig1 NP_001134926 2421,31 1093,93
 Galectin-9 CL1161.Contig8 ACI66798 211,64 72,25
 Apoptosis-associated speck-like protein CL4101.Contig1 XP_003197975 8,37 9,03
 Tripartite motif-containing protein 16 CL8518.Contig3 ACI34059 53,16 20,02
 Apoptosis regulator BAX Unigene31520 ACI68449 27,07 10,92
 CASP8 and FADD-like apoptosis regulator Unigene16516 NP_001254595 6,07 3,69
Co-downregulated     
 Programmed cell death 4a CL4790.Contig1 NP_998153 −2,00 −2,54
 Death-associated protein kinase 2 CL11158.Contig1 XP_683154 −2,17 −3,02