Table 2 Predicted cysteine cathepsin genes in the T. molitor genome, and relative expression levels in the larval gut, as estimated by transcriptome data
Identification | NCBI accession 1 | Previous iterations (% Identity) | Expression (RPKM) | Expression (Rescue) | Active site residues 7 | Predicted annotation |
|---|---|---|---|---|---|---|
TmL13 | KP303287 | AM4-22 (ABC88769, 99%), AM3-32 (ABC88768, 99%)2; TmCysII, TmCysIII3; ppCal3 (AAP94048)4; 3QT45; Cont-08897, Bt-075835 | 19,726.5 | 8,496.6 | QCHN | cathepsin L |
TmL5 | KP303279 | ppCAL2 (AAR05023, 97%)4; 3QJ35; Cont-01354, Bt-075286 | 1,356.6 | 572.7 | QCHN | cathepsin L |
TmL11 | KP303285 | Cont-00009, Bt-014976 | 1,149.4 | 354.9 | QCHN | cathepsin L |
TmL2 | KP303276 | ppCAL1a,b,c (AAP94046, 100%)4; Cont-09057, Bt-001115 | 337.3 | 263.5 | QCHN | cathepsin L |
TmL4 | KP303278 | 326.9 | 168.9 | QCHN | cathepsin L | |
TmL1 | KP303275 | 162.2 | 113.9 | QCHN | cathepsin L | |
TmL30* | KP303289 | 130.3 | 104.4 | ESHN | cathepsin L homolog | |
TmL29* | KP303289 | 130.3 | 104.4 | QAHN | cathepsin L homolog | |
TmL3 | KP303277 | AAP94047 (91%)3 | 62.1 | 31.3 | QCHN | cathepsin L |
TmL9 | KP303283 | 72.0 | 46.0 | QCHN | cathepsin L | |
TmL7 | KP303281 | 25.3 | 11.7 | QCHN | cathepsin L | |
TmL6 | KP303280 | Bt-07886 | 15.8 | 5.8 | QCHN | cathepsin L |
TmL8 | KP303282 | 5.7 | 3.7 | QCHN | cathepsin L | |
TmL15 | KP303288 | 0.2 | 0.2 | QCHN | cathepsin L | |
TmB33 | KP303302 | AM4-18 (ABC88766, 98%)2; TmCysII3; Cont-09310, Bt-002495 | 2,489.6 | 1,160.4 | QCSN HH | cathepsin B |
TmB20 | KP303293 | АМ3-87 (ABC88767, 99%)2; Cont-008906 | 448.4 | 221.5 | QCHN | cathepsin B-like |
TmB25 | KP303297 | 672.6 | 296.7 | QCHN | cathepsin B-like | |
TmB26 | KP303298 | Cont-08975, Bt-082376 | 657.5 | 431.6 | QCHN | cathepsin B-like |
TmB18 | KP303291 | 283.2 | 175.8 | QCHN HH | cathepsin B | |
TmB17 | KP303290 | Cont-00240, Bt-014536 | 163.9 | 99.0 | QCHN HH | cathepsin B |
TmB32* | KP303301 | 77.9 | 37.5 | QSHN | cathepsin B homolog | |
TmB23 | KP303295 | 48.8 | 29.3 | QCHN | cathepsin B-like | |
TmB19 | KP303292 | 34.2 | 24.9 | QCHN | cathepsin B-like | |
TmB27 | KP303299 | 26.5 | 13.9 | QCHN | cathepsin B-like | |
TmB24 | KP303296 | 20.0 | 6.5 | QCHN | cathepsin B-like | |
TmB28 | KP303300 | 4.0 | 2.2 | QCHN | cathepsin B-like | |
TmB22 | KP303294 | 1.2 | 0.7 | QCHN | cathepsin B-like | |
TmO12 | KP303286 | 38.4 | 22.2 | QCHN | cathepsin O | |
TmF10 | KP303284 | 23.4 | 8.4 | QCHN | cathepsin F |