Figure 3

Metabolic pathways directly regulated by NdgR. The proteins identified by ChIP-seq are depicted by red characters. (A) NdgR directly regulates genes in most steps of the BCAA biosynthesis pathways. Though LeuA was not annotated as a member of NdgR regulon, the putative motif from genome-wide prediction using FIMO and low binding signal in ChIP-seq data was observed in its upstream region. (B) The sulfur assimilation into the cysteine biosynthesis pathways.