TY - JOUR AU - Putnam, N. AU - Srivastava, M. AU - Hellsten, U. AU - Dirks, B. AU - Chapman, J. AU - Salamov, A. AU - Terry, A. AU - Shapiro, H. AU - Lindquist, E. AU - Kapitonov, V. PY - 2007 DA - 2007// TI - Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization JO - Science VL - 317 UR - https://doi.org/10.1126/science.1139158 DO - 10.1126/science.1139158 ID - Putnam2007 ER - TY - JOUR AU - Park, E. AU - Hwang, D. -. S. AU - Lee, J. -. S. AU - Song, J. -. I. AU - Seo, T. -. K. AU - Won, Y. -. J. PY - 2012 DA - 2012// TI - Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record JO - Mol Phylogenet Evol VL - 62 UR - https://doi.org/10.1016/j.ympev.2011.10.008 DO - 10.1016/j.ympev.2011.10.008 ID - Park2012 ER - TY - JOUR AU - Purcell, J. E. AU - Uye, S. AU - Lo, W. PY - 2007 DA - 2007// TI - Anthropogenic causes of jellyfish blooms and their direct consequences for humans: a review JO - Mar Ecol Prog Ser VL - 350 UR - https://doi.org/10.3354/meps07093 DO - 10.3354/meps07093 ID - Purcell2007 ER - TY - JOUR AU - Richardson, A. J. AU - Bakun, A. AU - Hays, G. C. AU - Gibbons, M. J. PY - 2009 DA - 2009// TI - The jellyfish joyride: causes, consequences and management responses to a more gelatinous future JO - Trends Ecol Evol VL - 24 UR - https://doi.org/10.1016/j.tree.2009.01.010 DO - 10.1016/j.tree.2009.01.010 ID - Richardson2009 ER - TY - JOUR AU - Condon, R. H. AU - Steinberg, D. K. AU - Giorgio, P. A. AU - Bouvier, T. C. AU - Bronk, D. A. AU - Graham, W. M. AU - Ducklow, H. W. PY - 2011 DA - 2011// TI - Jellyfish blooms result in a major microbial respiratory sink of carbon in marine systems JO - PNAS VL - 108 UR - https://doi.org/10.1073/pnas.1015782108 DO - 10.1073/pnas.1015782108 ID - Condon2011 ER - TY - JOUR AU - Prieto, L. AU - Astorga, D. AU - Navarro, G. AU - Ruiz, J. PY - 2010 DA - 2010// TI - Environmental control of phase transition and polyp survival of a massive-outbreaker jellyfish JO - PLoS ONE VL - 5 UR - https://doi.org/10.1371/journal.pone.0013793 DO - 10.1371/journal.pone.0013793 ID - Prieto2010 ER - TY - JOUR AU - Purcell, J. E. AU - Hoover, R. A. AU - Schwarck, N. T. PY - 2009 DA - 2009// TI - Inter annual variation of strobilation by the scyphozoan Aurelia labiata in relation to polyp density, temperature, salinity, and light conditions in situ JO - Mar Ecol Prog Ser VL - 375 UR - https://doi.org/10.3354/meps07785 DO - 10.3354/meps07785 ID - Purcell2009 ER - TY - JOUR AU - Willcox, S. AU - Moltschaniwskyj, N. A. AU - Crawford, C. PY - 2007 DA - 2007// TI - Asexual reproduction in scyphistomae of Aurelia sp.: effects of temperature and salinity in an experimental study JO - J Exp Mar Biol Ecol VL - 353 UR - https://doi.org/10.1016/j.jembe.2007.09.006 DO - 10.1016/j.jembe.2007.09.006 ID - Willcox2007 ER - TY - JOUR AU - Purcell, J. E. PY - 2007 DA - 2007// TI - Environmental effects on asexual reproduction rates of the scyphozoan Aurelia labiata JO - Mar Ecol Prog Ser VL - 348 UR - https://doi.org/10.3354/meps07056 DO - 10.3354/meps07056 ID - Purcell2007 ER - TY - JOUR AU - Camillo, C. G. AU - Betti, F. AU - Bo, M. AU - Martinelli, M. AU - Puce, S. AU - Bavestrello, G. PY - 2010 DA - 2010// TI - Contribution to the understanding of seasonal cycle of Aurelia aurita (Cnidaria: Scyphozoa) scyphopolyps in the northern Adriatic Sea JO - J Mar Biol Assoc UK VL - 90 UR - https://doi.org/10.1017/S0025315409000848 DO - 10.1017/S0025315409000848 ID - Camillo2010 ER - TY - JOUR AU - Ishii, H. AU - Katsukoshi, K. PY - 2010 DA - 2010// TI - Seasonal and vertical distribution of Aurelia aurita polyps on a pylon in the innermost part of Tokyo Bay JO - J Oceanogr VL - 66 UR - https://doi.org/10.1007/s10872-010-0029-5 DO - 10.1007/s10872-010-0029-5 ID - Ishii2010 ER - TY - JOUR AU - Miller, M. -. E. C. AU - Graham, W. M. PY - 2012 DA - 2012// TI - Environmental evidence that seasonal hypoxia enhances survival and success of jellyfish polyps in the northern Gulf of Mexico JO - J Exp Mar Biol Ecol VL - 432–433 UR - https://doi.org/10.1016/j.jembe.2012.07.015 DO - 10.1016/j.jembe.2012.07.015 ID - Miller2012 ER - TY - JOUR AU - Fuchs, B. AU - Wang, W. AU - Graspeuntner, S. AU - Li, Y. AU - Insua, S. AU - Herbst, E. -. M. AU - Dirksen, P. AU - Böhm, A. -. M. AU - Hemmrich, G. AU - Sommer, F. PY - 2014 DA - 2014// TI - Regulation of polyp-to-jellyfish transition in Aurelia aurita JO - Curr Biol VL - 24 UR - https://doi.org/10.1016/j.cub.2013.12.003 DO - 10.1016/j.cub.2013.12.003 ID - Fuchs2014 ER - TY - JOUR AU - Kusserow, A. AU - Pang, K. AU - Sturm, C. AU - Hrouda, M. AU - Lentfer, J. AU - Schmidt, H. AU - Technau, U. AU - Haeseler, A. AU - Hobmayer, B. AU - Martindale, M. PY - 2005 DA - 2005// TI - Unexpected complexity of the Wnt gene family in a sea anemone JO - Nature VL - 433 UR - https://doi.org/10.1038/nature03158 DO - 10.1038/nature03158 ID - Kusserow2005 ER - TY - JOUR AU - Kroiher, M. AU - Siefker, B. AU - Berking, S. PY - 2000 DA - 2000// TI - Induction of segmentation in polyps of Aurelia aurita (Cnidaria, Scyphozoa) into medusae and formation of mirror-image medusa anlagen JO - Int J Dev Biol VL - 44 ID - Kroiher2000 ER - TY - JOUR AU - Spangenberg, D. B. PY - 1967 DA - 1967// TI - Iodine induction of metamorphosis in Aurelia JO - J Exp Zool VL - 165 UR - https://doi.org/10.1002/jez.1401650312 DO - 10.1002/jez.1401650312 ID - Spangenberg1967 ER - TY - JOUR AU - Lotan, A. AU - Fine, M. AU - Ben-Hillel, R. PY - 1994 DA - 1994// TI - Synchronization of the life cycle and dispersal pattern of the tropical invader scyphomedusan Rhopilema nomadica is temperature dependent JO - Mar Ecol Prog Ser VL - 109 UR - https://doi.org/10.3354/meps109059 DO - 10.3354/meps109059 ID - Lotan1994 ER - TY - JOUR AU - Kuniyoshi, H. AU - Okumura, I. AU - Kuroda, R. AU - Tsujita, N. AU - Arakawa, K. AU - Shoji, J. AU - Saito, T. AU - Osada, H. PY - 2012 DA - 2012// TI - Indomethacin induction of metamorphosis from the asexual stage to sexual stage in the Moon Jellyfish, Aurelia aurita JO - Biosci Biotechnol Biochem VL - 76 UR - https://doi.org/10.1271/bbb.120076 DO - 10.1271/bbb.120076 ID - Kuniyoshi2012 ER - TY - JOUR AU - Schroth, W. AU - Jarms, G. AU - Streit, B. AU - Schierwater, B. PY - 2002 DA - 2002// TI - Speciation and phylogeography in the cosmopolitan marine moon jelly, Aurelia sp JO - BMC Evol Biol VL - 2 UR - https://doi.org/10.1186/1471-2148-2-1 DO - 10.1186/1471-2148-2-1 ID - Schroth2002 ER - TY - JOUR AU - Grabherr, M. G. AU - Haas, B. J. AU - Yassour, M. AU - Levin, J. Z. AU - Thompson, D. A. AU - Amit, I. AU - Adiconis, X. AU - Fan, L. AU - Raychowdhury, R. AU - Zeng, Q. PY - 2011 DA - 2011// TI - Full-length transcriptome assembly from RNA-Seq data without a reference genome JO - Nat Biotech VL - 29 UR - https://doi.org/10.1038/nbt.1883 DO - 10.1038/nbt.1883 ID - Grabherr2011 ER - TY - JOUR AU - Haas, B. AU - Papanicolaou, A. AU - Yassour, M. AU - Grabherr, M. AU - Blood, P. AU - Bowden, J. AU - Couger, M. B. AU - Eccles, D. AU - Li, B. AU - Lieber, M. PY - 2013 DA - 2013// TI - De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis JO - Nat Protoc VL - 8 UR - https://doi.org/10.1038/nprot.2013.084 DO - 10.1038/nprot.2013.084 ID - Haas2013 ER - TY - JOUR AU - Tatusov, R. L. AU - Fedorova, N. D. AU - Jackson, J. D. AU - Jacobs, A. R. AU - Kiryutin, B. AU - Koonin, E. V. AU - Krylov, D. M. AU - Mazumder, R. AU - Mekhedov, S. L. AU - Nikolskaya, A. N. PY - 2003 DA - 2003// TI - The COG database: an updated version includes eukaryotes JO - BMC Bioinformatics VL - 4 UR - https://doi.org/10.1186/1471-2105-4-41 DO - 10.1186/1471-2105-4-41 ID - Tatusov2003 ER - TY - JOUR AU - Parra, G. AU - Bradnam, K. AU - Korf, I. PY - 2007 DA - 2007// TI - CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes JO - Bioinformatics VL - 23 UR - https://doi.org/10.1093/bioinformatics/btm071 DO - 10.1093/bioinformatics/btm071 ID - Parra2007 ER - TY - JOUR AU - Martin, J. A. AU - Wang, Z. PY - 2011 DA - 2011// TI - Next-generation transcriptome assembly JO - Nat Rev Genet VL - 12 UR - https://doi.org/10.1038/nrg3068 DO - 10.1038/nrg3068 ID - Martin2011 ER - TY - JOUR AU - Yuan, D. AU - Nakanishi, N. AU - Jacobs, D. AU - Hartenstein, V. PY - 2008 DA - 2008// TI - Embryonic development and metamorphosis of the scyphozoan Aurelia JO - Dev Genes Evol VL - 218 UR - https://doi.org/10.1007/s00427-008-0254-8 DO - 10.1007/s00427-008-0254-8 ID - Yuan2008 ER - TY - JOUR AU - Yoshiba, S. AU - Hamada, H. PY - 2014 DA - 2014// TI - Roles of cilia, fluid flow, and Ca2+ signaling in breaking of left–right symmetry JO - Trends Genet VL - 30 UR - https://doi.org/10.1016/j.tig.2013.09.001 DO - 10.1016/j.tig.2013.09.001 ID - Yoshiba2014 ER - TY - JOUR AU - Hensel, K. AU - Lotan, T. AU - Sanders, S. M. AU - Cartwright, P. AU - Frank, U. PY - 2014 DA - 2014// TI - Lineage-specific evolution of cnidarian Wnt ligands JO - Evol Dev VL - 16 UR - https://doi.org/10.1111/ede.12089 DO - 10.1111/ede.12089 ID - Hensel2014 ER - TY - JOUR AU - Degnan, B. M. AU - Vervoort, M. AU - Larroux, C. AU - Richards, G. S. PY - 2009 DA - 2009// TI - Early evolution of metazoan transcription factors JO - Curr Opin Genet Dev VL - 19 UR - https://doi.org/10.1016/j.gde.2009.09.008 DO - 10.1016/j.gde.2009.09.008 ID - Degnan2009 ER - TY - JOUR AU - Yu, X. AU - Ng, C. P. AU - Habacher, H. AU - Roy, S. PY - 2008 DA - 2008// TI - Foxj1 transcription factors are master regulators of the motile ciliogenic program JO - Nat Genet VL - 40 UR - https://doi.org/10.1038/ng.263 DO - 10.1038/ng.263 ID - Yu2008 ER - TY - JOUR AU - Vij, S. AU - Rink, J. C. AU - Ho, H. K. AU - Babu, D. AU - Eitel, M. AU - Narasimhan, V. AU - Tiku, V. AU - Westbrook, J. AU - Schierwater, B. AU - Roy, S. PY - 2012 DA - 2012// TI - Evolutionarily ancient association of the FoxJ1 transcription factor with the motile ciliogenic program JO - PLoS Genet VL - 8 UR - https://doi.org/10.1371/journal.pgen.1003019 DO - 10.1371/journal.pgen.1003019 ID - Vij2012 ER - TY - JOUR AU - Jarman, A. P. AU - Groves, A. K. PY - 2013 DA - 2013// TI - The role of Atonal transcription factors in the development of mechanosensitive cells JO - Semin Cell Dev Biol VL - 24 UR - https://doi.org/10.1016/j.semcdb.2013.03.010 DO - 10.1016/j.semcdb.2013.03.010 ID - Jarman2013 ER - TY - JOUR AU - Reig, G. AU - Cabrejos, M. E. AU - Concha, M. L. PY - 2007 DA - 2007// TI - Functions of BarH transcription factors during embryonic development JO - Dev Biol VL - 302 UR - https://doi.org/10.1016/j.ydbio.2006.10.008 DO - 10.1016/j.ydbio.2006.10.008 ID - Reig2007 ER - TY - JOUR AU - Dunlap, W. AU - Starcevic, A. AU - Baranasic, D. AU - Diminic, J. AU - Zucko, J. AU - Gacesa, R. AU - Oppen, M. J. AU - Hranueli, D. AU - Cullum, J. AU - Long, P. PY - 2013 DA - 2013// TI - KEGG orthology-based annotation of the predicted proteome of Acropora digitifera: ZoophyteBase - an open access and searchable database of a coral genome JO - BMC Genomics VL - 14 UR - https://doi.org/10.1186/1471-2164-14-509 DO - 10.1186/1471-2164-14-509 ID - Dunlap2013 ER - TY - JOUR AU - Stubbs, J. L. AU - Oishi, I. AU - Belmonte, J. C. I. AU - Kintner, C. PY - 2008 DA - 2008// TI - The forkhead protein Foxj1 specifies node-like cilia in Xenopus and zebrafish embryos JO - Nat Genet VL - 40 UR - https://doi.org/10.1038/ng.267 DO - 10.1038/ng.267 ID - Stubbs2008 ER - TY - JOUR AU - Yu, H. PY - 2002 DA - 2002// TI - Regulation of APC–Cdc20 by the spindle checkpoint JO - Curr Opin Cell Biol VL - 14 UR - https://doi.org/10.1016/S0955-0674(02)00382-4 DO - 10.1016/S0955-0674(02)00382-4 ID - Yu2002 ER - TY - JOUR AU - Gönczy, P. PY - 2012 DA - 2012// TI - Towards a molecular architecture of centriole assembly JO - Nat Rev Mol Cell Biol VL - 13 UR - https://doi.org/10.1038/nrm3373 DO - 10.1038/nrm3373 ID - Gönczy2012 ER - TY - CHAP AU - Stöcker, W. AU - Gomis-Rüth, F. X. ED - Brix, K. ED - Stöcker, W. PY - 2013 DA - 2013// TI - Astacins: Proteases in Development and Tissue Differentiation BT - Proteases: Structure and Function PB - Springer CY - Vienna UR - https://doi.org/10.1007/978-3-7091-0885-7_7 DO - 10.1007/978-3-7091-0885-7_7 ID - Stöcker2013 ER - TY - JOUR AU - Möhrlen, F. AU - Maniura, M. AU - Plickert, G. AU - Frohme, M. AU - Frank, U. PY - 2006 DA - 2006// TI - Evolution of astacin‐like metalloproteases in animals and their function in development JO - Evol Dev VL - 8 UR - https://doi.org/10.1111/j.1525-142X.2006.00092.x DO - 10.1111/j.1525-142X.2006.00092.x ID - Möhrlen2006 ER - TY - JOUR AU - Pan, T. L. AU - Gröger, H. AU - Schmid, V. AU - Spring, J. PY - 1998 DA - 1998// TI - A toxin homology domain in an astacin-like metalloproteinase of the jellyfish Podocoryne carnea with a dual role in digestion and development JO - Dev Genes Evol VL - 208 UR - https://doi.org/10.1007/s004270050180 DO - 10.1007/s004270050180 ID - Pan1998 ER - TY - JOUR AU - Sanders, S. AU - Shcheglovitova, M. AU - Cartwright, P. PY - 2014 DA - 2014// TI - Differential gene expression between functionally specialized polyps of the colonial hydrozoan Hydractinia symbiolongicarpus (Phylum Cnidaria) JO - BMC Genomics VL - 15 UR - https://doi.org/10.1186/1471-2164-15-406 DO - 10.1186/1471-2164-15-406 ID - Sanders2014 ER - TY - JOUR AU - Yan, L. AU - Fei, K. AU - Zhang, J. AU - Dexter, S. AU - Sarras, M. P. PY - 2000 DA - 2000// TI - Identification and characterization of hydra metalloproteinase 2 (HMP2): a meprin-like astacin metalloproteinase that functions in foot morphogenesis JO - Development VL - 127 ID - Yan2000 ER - TY - JOUR AU - Chiori, R. AU - Jager, M. AU - Denker, E. AU - Wincker, P. AU - Silva, C. AU - Guyader, H. AU - Manuel, M. AU - Queinnec, E. PY - 2009 DA - 2009// TI - Are Hox genes ancestrally involved in axial patterning? Evidence from the Hydrozoan Clytia hemisphaerica (Cnidaria) JO - PLoS ONE VL - 4 UR - https://doi.org/10.1371/journal.pone.0004231 DO - 10.1371/journal.pone.0004231 ID - Chiori2009 ER - TY - JOUR AU - Ryan, J. F. AU - Mazza, M. E. AU - Pang, K. AU - Matus, D. Q. AU - Baxevanis, A. D. AU - Martindale, M. Q. AU - Finnerty, J. R. PY - 2007 DA - 2007// TI - Pre-bilaterian origins of the Hox cluster and the Hox code: evidence from the sea anemone, Nematostella vectensis JO - PLoS ONE VL - 2 UR - https://doi.org/10.1371/journal.pone.0000153 DO - 10.1371/journal.pone.0000153 ID - Ryan2007 ER - TY - JOUR AU - Kamm, K. AU - Schierwater, B. AU - Jakob, W. AU - Dellaporta, S. L. AU - Miller, D. J. PY - 2006 DA - 2006// TI - Axial patterning and diversification in the Cnidaria predate the Hox system JO - Curr Biol VL - 16 UR - https://doi.org/10.1016/j.cub.2006.03.036 DO - 10.1016/j.cub.2006.03.036 ID - Kamm2006 ER - TY - JOUR AU - Finnerty, J. R. AU - Pang, K. AU - Burton, P. AU - Paulson, D. AU - Martindale, M. Q. PY - 2004 DA - 2004// TI - Origins of bilateral symmetry: Hox and Dpp expression in a Sea Anemone JO - Science VL - 304 UR - https://doi.org/10.1126/science.1091946 DO - 10.1126/science.1091946 ID - Finnerty2004 ER - TY - JOUR AU - Hudry, B. AU - Thomas-Chollier, M. AU - Volovik, Y. AU - Duffraisse, M. AU - Dard, A. AU - Frank, D. AU - Technau, U. AU - Merabet, S. PY - 2014 DA - 2014// TI - Molecular insights into the origin of the Hox-TALE patterning system JO - eLife VL - 3 UR - https://doi.org/10.7554/eLife.01939 DO - 10.7554/eLife.01939 ID - Hudry2014 ER - TY - JOUR AU - Rytkönen, K. T. AU - Williams, T. A. AU - Renshaw, G. M. AU - Primmer, C. R. AU - Nikinmaa, M. PY - 2011 DA - 2011// TI - Molecular evolution of the metazoan PHD–HIF oxygen-sensing system JO - Mol Biol Evol VL - 28 UR - https://doi.org/10.1093/molbev/msr012 DO - 10.1093/molbev/msr012 ID - Rytkönen2011 ER - TY - JOUR AU - Wang, G. AU - Yu, Z. AU - Zhen, Y. AU - Mi, T. AU - Shi, Y. AU - Wang, J. AU - Wang, M. AU - Sun, S. PY - 2014 DA - 2014// TI - Molecular characterisation, evolution and expression of hypoxia-inducible factor in Aurelia sp.1 JO - PLoS ONE VL - 9 UR - https://doi.org/10.1371/journal.pone.0100057 DO - 10.1371/journal.pone.0100057 ID - Wang2014 ER - TY - JOUR AU - Hobmayer, B. AU - Rentzsch, F. AU - Kuhn, K. AU - Happel, C. M. AU - Laue, C. C. AU - Snyder, P. AU - Rothbächer, U. AU - Holstein, T. W. PY - 2000 DA - 2000// TI - WNT signalling molecules act in axis formation in the diploblastic metazoan Hydra JO - Nature VL - 407 UR - https://doi.org/10.1038/35025063 DO - 10.1038/35025063 ID - Hobmayer2000 ER - TY - JOUR AU - Petersen, C. P. AU - Reddien, P. W. PY - 2009 DA - 2009// TI - Wnt signaling and the polarity of the primary body axis JO - Cell VL - 139 UR - https://doi.org/10.1016/j.cell.2009.11.035 DO - 10.1016/j.cell.2009.11.035 ID - Petersen2009 ER - TY - JOUR AU - Guder, C. AU - Pinho, S. AU - Nacak, T. G. AU - Schmidt, H. A. AU - Hobmayer, B. AU - Niehrs, C. AU - Holstein, T. W. PY - 2006 DA - 2006// TI - An ancient Wnt-Dickkopf antagonism in Hydra JO - Development VL - 133 UR - https://doi.org/10.1242/dev.02265 DO - 10.1242/dev.02265 ID - Guder2006 ER - TY - JOUR AU - Bork, P. AU - Beckmann, G. PY - 1993 DA - 1993// TI - The CUB domain: a widespread module in developmentally regulated proteins JO - J Mol Biol VL - 231 UR - https://doi.org/10.1006/jmbi.1993.1305 DO - 10.1006/jmbi.1993.1305 ID - Bork1993 ER - TY - JOUR AU - Kostrouch, Z. AU - Kostrouchova, M. AU - Love, W. AU - Jannini, E. AU - Piatigorsky, J. AU - Rall, J. E. PY - 1998 DA - 1998// TI - Retinoic acid X receptor in the diploblast, Tripedalia cystophora JO - PNAS VL - 95 UR - https://doi.org/10.1073/pnas.95.23.13442 DO - 10.1073/pnas.95.23.13442 ID - Kostrouch1998 ER - TY - JOUR AU - Knoedler, J. R. AU - Denver, R. J. PY - 2014 DA - 2014// TI - Krüppel-like factors are effectors of nuclear receptor signaling JO - Gen Comp Endocrinol VL - 203 UR - https://doi.org/10.1016/j.ygcen.2014.03.003 DO - 10.1016/j.ygcen.2014.03.003 ID - Knoedler2014 ER - TY - JOUR AU - McCormick, L. J. AU - Hutt, J. A. AU - Hazan, J. AU - Houart, C. AU - Cohen, J. PY - 2007 DA - 2007// TI - The homeodomain transcription factor drg11 is expressed in primary sensory neurons and their putative CNS targets during embryonic development of the zebrafish JO - Gene Expr Patterns VL - 7 UR - https://doi.org/10.1016/j.modgep.2006.09.003 DO - 10.1016/j.modgep.2006.09.003 ID - McCormick2007 ER - TY - JOUR AU - Nomaksteinsky, M. AU - Kassabov, S. AU - Chettouh, Z. AU - Stoekle, H. -. C. AU - Bonnaud, L. AU - Fortin, G. AU - Kandel, E. AU - Brunet, J. -. F. PY - 2013 DA - 2013// TI - Ancient origin of somatic and visceral neurons JO - BMC Biol VL - 11 UR - https://doi.org/10.1186/1741-7007-11-53 DO - 10.1186/1741-7007-11-53 ID - Nomaksteinsky2013 ER - TY - JOUR AU - Nakanishi, N. AU - Yuan, D. AU - Hartenstein, V. AU - Jacobs, D. K. PY - 2010 DA - 2010// TI - Evolutionary origin of rhopalia: insights from cellular-level analyses of Otx and POU expression patterns in the developing rhopalial nervous system JO - Evol Dev VL - 12 UR - https://doi.org/10.1111/j.1525-142X.2010.00427.x DO - 10.1111/j.1525-142X.2010.00427.x ID - Nakanishi2010 ER - TY - JOUR AU - Nakanishi, N. AU - Hartenstein, V. AU - Jacobs, D. PY - 2009 DA - 2009// TI - Development of the rhopalial nervous system in Aurelia sp.1 (Cnidaria, Scyphozoa) JO - Dev Genes Evol VL - 219 UR - https://doi.org/10.1007/s00427-009-0291-y DO - 10.1007/s00427-009-0291-y ID - Nakanishi2009 ER - TY - JOUR AU - Rattner, A. AU - Smallwood, P. M. AU - Nathans, J. PY - 2000 DA - 2000// TI - Identification and characterization of all-trans-retinol dehydrogenase from photoreceptor outer segments, the visual cycle enzyme that reduces all-trans-retinal to all-trans-retinol JO - J Biol Chem VL - 275 UR - https://doi.org/10.1074/jbc.275.15.11034 DO - 10.1074/jbc.275.15.11034 ID - Rattner2000 ER - TY - JOUR AU - Fritzsch, B. AU - Eberl, D. F. AU - Beisel, K. W. PY - 2010 DA - 2010// TI - The role of bHLH genes in ear development and evolution: revisiting a 10-year-old hypothesis JO - Cell Mol Life Sci VL - 67 UR - https://doi.org/10.1007/s00018-010-0403-x DO - 10.1007/s00018-010-0403-x ID - Fritzsch2010 ER - TY - JOUR AU - Seipel, K. AU - Yanze, N. AU - Schmid, V. PY - 2004 DA - 2004// TI - Developmental and evolutionary aspects of the basic helix-loop-helix transcription factors Atonal-like 1 and Achaete-scute homolog 2 in the jellyfish JO - Dev Biol VL - 269 UR - https://doi.org/10.1016/j.ydbio.2004.01.035 DO - 10.1016/j.ydbio.2004.01.035 ID - Seipel2004 ER - TY - JOUR AU - Gambini, C. AU - Abou, B. AU - Ponton, A. AU - Cornelissen, A. J. M. PY - 2012 DA - 2012// TI - Micro- and macrorheology of jellyfish extracellular matrix JO - Biophys J VL - 102 UR - https://doi.org/10.1016/j.bpj.2011.11.4004 DO - 10.1016/j.bpj.2011.11.4004 ID - Gambini2012 ER - TY - JOUR AU - Sarras, M. P. PY - 2012 DA - 2012// TI - Components, structure, biogenesis and function of the Hydra extracellular matrix in regeneration, pattern formation and cell differentiation JO - Int J Dev Biol VL - 56 UR - https://doi.org/10.1387/ijdb.113445ms DO - 10.1387/ijdb.113445ms ID - Sarras2012 ER - TY - JOUR AU - Hynes, R. O. PY - 2012 DA - 2012// TI - The evolution of metazoan extracellular matrix JO - J Cell Biol VL - 196 UR - https://doi.org/10.1083/jcb.201109041 DO - 10.1083/jcb.201109041 ID - Hynes2012 ER - TY - JOUR AU - Huxley - Jones, J. AU - Robertson, D. L. AU - Boot-Handford, R. P. PY - 2007 DA - 2007// TI - On the origins of the extracellular matrix in vertebrates JO - Matrix Biol VL - 26 UR - https://doi.org/10.1016/j.matbio.2006.09.008 DO - 10.1016/j.matbio.2006.09.008 ID - Huxley - Jones2007 ER - TY - JOUR AU - Shaposhnikova, T. AU - Matveev, I. AU - Napara, T. AU - Podgornaya, O. PY - 2005 DA - 2005// TI - Mesogleal cells of the jellyfish Aurelia aurita are involved in the formation of mesogleal fibres JO - Cell Biol Int VL - 29 UR - https://doi.org/10.1016/j.cellbi.2005.08.008 DO - 10.1016/j.cellbi.2005.08.008 ID - Shaposhnikova2005 ER - TY - JOUR AU - Vogel, B. E. AU - Muriel, J. M. AU - Dong, C. AU - Xu, X. PY - 2006 DA - 2006// TI - Hemicentins: what have we learned from worms? JO - Cell Res VL - 16 UR - https://doi.org/10.1038/sj.cr.7310100 DO - 10.1038/sj.cr.7310100 ID - Vogel2006 ER - TY - JOUR AU - Amthor, H. AU - Nicholas, G. AU - McKinnell, I. AU - Kemp, C. F. AU - Sharma, M. AU - Kambadur, R. AU - Patel, K. PY - 2004 DA - 2004// TI - Follistatin complexes Myostatin and antagonises Myostatin-mediated inhibition of myogenesis JO - Dev Biol VL - 270 UR - https://doi.org/10.1016/j.ydbio.2004.01.046 DO - 10.1016/j.ydbio.2004.01.046 ID - Amthor2004 ER - TY - JOUR AU - Pícha, J. AU - Vaněk, V. AU - Buděšínský, M. AU - Mládková, J. AU - Garrow, T. A. AU - Jiráček, J. PY - 2013 DA - 2013// TI - The development of a new class of inhibitors for betaine-homocysteine S-methyltransferase JO - Eur J Cell Bio VL - 65 ID - Pícha2013 ER - TY - JOUR AU - Pajares, M. A. AU - Pérez-Sala, D. PY - 2006 DA - 2006// TI - Betaine homocysteine S-methyltransferase: just a regulator of homocysteine metabolism? JO - Cell Mol Life Sci VL - 63 UR - https://doi.org/10.1007/s00018-006-6249-6 DO - 10.1007/s00018-006-6249-6 ID - Pajares2006 ER - TY - JOUR AU - Rao, P. V. AU - Garrow, T. A. AU - John, F. AU - Garland, D. AU - Millian, N. S. AU - Zigler, J. S. PY - 1998 DA - 1998// TI - Betaine-homocysteine methyltransferase is a developmentally regulated enzyme crystallin in Rhesus Monkey lens JO - J Biol Chem VL - 273 UR - https://doi.org/10.1074/jbc.273.46.30669 DO - 10.1074/jbc.273.46.30669 ID - Rao1998 ER - TY - JOUR AU - Robinson, M. AU - Oshlack, A. PY - 2010 DA - 2010// TI - A scaling normalization method for differential expression analysis of RNA-seq data JO - Genome Biol VL - 11 UR - https://doi.org/10.1186/gb-2010-11-3-r25 DO - 10.1186/gb-2010-11-3-r25 ID - Robinson2010 ER - TY - JOUR AU - Robinson, M. D. AU - McCarthy, D. J. AU - Smyth, G. K. PY - 2010 DA - 2010// TI - edgeR: a Bioconductor package for differential expression analysis of digital gene expression data JO - Bioinformatics VL - 26 UR - https://doi.org/10.1093/bioinformatics/btp616 DO - 10.1093/bioinformatics/btp616 ID - Robinson2010 ER - TY - JOUR AU - Langfelder, P. AU - Horvath, S. PY - 2008 DA - 2008// TI - WGCNA: an R package for weighted correlation network analysis JO - BMC Bioinformatics VL - 9 UR - https://doi.org/10.1186/1471-2105-9-559 DO - 10.1186/1471-2105-9-559 ID - Langfelder2008 ER - TY - JOUR AU - Vaquerizas, J. M. AU - Kummerfeld, S. K. AU - Teichmann, S. A. AU - Luscombe, N. M. PY - 2009 DA - 2009// TI - A census of human transcription factors: function, expression and evolution JO - Nat Rev Genet VL - 10 UR - https://doi.org/10.1038/nrg2538 DO - 10.1038/nrg2538 ID - Vaquerizas2009 ER - TY - JOUR AU - Tamura, K. AU - Peterson, D. AU - Peterson, N. AU - Stecher, G. AU - Nei, M. AU - Kumar, S. PY - 2011 DA - 2011// TI - MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods JO - Mol Biol Evol VL - 28 UR - https://doi.org/10.1093/molbev/msr121 DO - 10.1093/molbev/msr121 ID - Tamura2011 ER - TY - JOUR AU - Tamura, K. AU - Nei, M. PY - 1993 DA - 1993// TI - Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees JO - Mol Biol Evol VL - 10 ID - Tamura1993 ER - TY - JOUR AU - Tamura, K. AU - Nei, M. AU - Kumar, S. PY - 2004 DA - 2004// TI - Prospects for inferring very large phylogenies by using the neighbor-joining method JO - PNAS VL - 101 UR - https://doi.org/10.1073/pnas.0404206101 DO - 10.1073/pnas.0404206101 ID - Tamura2004 ER -