Skip to main content

Table 2 Trimmed sequence read statistics

From: Virus genome dynamics under different propagation pressures: reconstruction of whole genome haplotypes of west nile viruses from NGS data

Strain

Isolate

Total read count

Trimmed read count

% Trimmed

Mean read length after trim (bp)

WNV349/77

C3

1,646,236

1,653,756

99.36

79.4

 

D1

2,054,204

2,051,074

99.85

80.7

 

E1

1,620,826

1,618,204

99.84

82.5

 

F1

1,972,894

1,969,863

99.85

82.1

 

G2

1,929,256

1,926,236

99.84

81.4

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us